Template-based Modeling Results for CBRA_ECOLI

Submitted Primary Sequence

>Length 354
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSTDILRSVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKD
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSTDILRSVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKD
CCCCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHEECCEEEECCCEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEEEEEEEEECCEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCCCCEEECCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSTDILRSVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKD
543100000000000000011012322100012233223311231011100220021013112212230011210010320102021233234100001031012001100321232012010120122332110001232231201010000020210200221123332320000001022443232110001120110000000331100000001132132112102210210123123212123010011122321100321000000000000001130000001002000100131133012201310131113100210101010010002001212122123245
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEHFDVAIIGLGPAGSALARKLAGKMQVIALDKKHQCGTEGFSKPCGGLLAPDAQRSFIRDGLTLPVDVIANPQIFSVKTVDVAASLTRNYQRSYININRHAFDLWMKSLIPASVEVYHDSLCRKIWREDDKWHVIFRADGWEQHITARYLVGADGANSMVRRHLYPDHQIRKYVAIQQWFAEKHPVPFYSCIFDNSITNCYSWSISKDGYFIFGGAYPMKDGQTRFTTLKEKMSAFQFQFGKTVKSEKCTVLFPSRWQDFVCGKDNAFLIGEAAGFISASSLEGISYALDSTDILRSVLLKQPEKLNTAYWRATRKLRLKLFGKIVKSRCLTAPALRKWIMRSGVAHIPQLKD
1	MUSTER	3cgvA	0.165	0.975	2.140	threading_1	GETYDVLVVGGGPGGSTAARYAAKYGLKTLIEKRP---EIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRPIILQ---NEVGYVLERDKFDKHLAALAAKAADVWVKSPALGVIKENGVAGAKIRHNNEIVDVRAK-VIAADGFESEFGRWAGLKARNDIISALQYRINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGANVGIGSSINWIHN-RFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKPITPGLLVGDAARLIDPITGGGIANAIVSGYAAQVTKEAIESN-DYSPQQKYEKLIKERFERKHLRNWVAKEKLADDTLDKLVDIVQVLTT
2	SPARKS	3atqa	0.159	0.977	3.551	threading_2	MKKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIG-DKPCGDAVSKAHFDKLGMPYPKGEENKINGIKLYSPDMQTVW-----TVNGEGFELNAPLYNQRVLKEAQDRGVEIWLTTAMKPIFEDGYVKGAVLFNNEELTVYSKVVVEATGYSRSFRSKLPPEDDKDADVAYREVLLTKEDIEDHDYLRIETSPGGYWWYFPKGKNVNVGLGIQGGMGPSIHEYYKKYLDKYAPDVDKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFS--ASGLWDMNICYVNEYGAKQASLDIFRRFLQKLSMKKKIIKEE
3	PROSPECT2	3e1tA	0.148	0.992	3.640	threading_3	PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLERE---AFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRRHEVIDVLFEGERAVGVRYTEGVELMAHARFIVDASGNRTRVSQAVGERSRFFQNVALYGYFENGKRLPAPGNILSAAFQDGWFWYIPLSDTLTSVGAVIKDGHEAALLRYIDRCPIIKEYLAPATRVTTIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAMSEQRCFEEFERRYRREYGNFYQFLVAFEERANEAFVRSNLDEPVFQSN
4	PPA-I	3cgvA	0.153	0.980	2.555	threading_4	GETYDVLVVGGGPGGSTAARYAAKYGLKTLIEKRP---EIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPS---EKRPIILQNEVGYVLERDKFDKHLAALAAKAGADVWKSPALGVIKENGKVAGAKIRHNNEIVDVRAKVIAADGFESEFGRWAGLKSVILAISALQYRINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGANVGIGSSINWI-HNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKPITPGLLVGDAARLIDPITGGGIANAIVSGYAAQVTKEAIESNPQQKYEKLIKERFERKHLRNWVAKEKLALSDDTLDKLVDIVSEQVLTT
5	HHPRED-l	2qa1_A	0.113	0.972	2.273	threading_5	RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVE-T---GESRGLGFTARTMEVFDQRGILPRFGEV-ETSTQHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVELQPR-MIGETLPGGMVMVGPLPGGIRIIVCERGTPP-PSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGATEELLDSYHSERHAVGKRLLMNTQLFVQPLRDVLTEL-I-QYGEVA-
6	HHPRED-g	3cgv_A	0.182	0.932	2.608	threading_6	-ETYDVLVVGGGPGGSTAARYAAKYGLKTL-IEKRP--EIGSPVRCGEGLSKGILNEADIKDRSFIANEVKGARIYGPSEKRIILQ-----NEVGYVLERDKFDKHLAALAAKAGADVWVSPALGVIKENGKVGAKIRHNNEIVDVRAK-VIAADGFESEFGRWAGLKSRNDIISALQYR-INVDVDPDYTDFYLGSAPAGYIWVFPKGE-ANVGIGSSINWRFELKNYLDRFIENHGLKKGQDIQLVTGGVSVSK--VK-PIT-PGL-LVGDAARLIDPITGGGIANAIVSG-YAAQVTKEAIESNDYQ--QKYEKLIKERFERKHLRNWVAKEKLA-L---SDLVDIVSEQV
7	SP3	3oz2a	0.166	0.986	3.758	threading_7	GETYDVLVVGGGPGGSTAARYAAKYGLKTLIEKRP---EIGSPVRCGEGLSKGILNEADIKADRSFIANVKGARIYGPSERPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWKSPALGVIKENGKVAGAKIRHNNEIVDVRAKVIAADGFESEFGRWAGLKSVILAISALQYRINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGANVGIGSSINW-IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKPITPGLLVGDAARLIDPITGGGIANAIVSG-YAAQVTKEAIESNDYSPQQKYEKLIKERFERKHLRNWVAKEKLDDTLDKLDIVSEQVLTT
8	SAM-T99	2qa1A	0.114	0.963	2.328	threading_8	-----VIVVGAGPAGMMLAGELRLAVEVVVLERL----VERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLADIRRGHEVLSLTDDGAGVTVEVRPEGKH-TLRAAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGV-ELQPRMIGETLPGGMVMVGPLPGGTRIIVCERGTPPPPSWHEVADAWKRLTGDDIAHAEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTTEELLDSYHSERHAVGKRLLMNTQAQGLLFLSGPEVQPLRDVLTE--
9	MUSTER	3i3lA1	0.157	0.989	1.998	threading_9	MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY----RVGESLLPGTMSILNRLGLQNYVKKPSATFLWGQDQAPWTFSFAAWVFDHAVQVKREEFDKLLLDEARSRITVHEETPVTDVDLDPDRVVLTVRRGGESVTVESDFVIDAGGSGGPISRKLGVRQEFYRNFAVWSYFKLKDPFDLKGTTYSITFEDGWVWMIPIDDLYSVGLVVDRSKSAEVREQADAFYSSTLAKCGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFKRRITESD
10	SPARKS	3oz2a	0.167	0.983	3.414	threading_10	GETYDVLVVGGGPGGSTAARYAAKYGLKTLIEKRP---EIGSPVRCGEGLSKGILNEADIKADRSFINEVKGARIYGPSEKRIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWKSPALGVIKENGVAGAKIRHNNEIVDVRAK-VIAADGFESEFGRWAGLKSVILAISALQYRINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGANVGIGSSINWIHN-RFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKPITPGLLVGDAARLIDPITGGGIANAIVSG-YAAQVTKEAIESNDYSPQQKYEKLIKERFERKHLRNWVAKEKLDDTLDKLIVSEQVLTTI

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.731 to 3c96A SCOP code=c.3.1.2	TM-score=0.743 to 3c96A SCOP code=c.3.1.2	TM-score=0.732 to 3c96A SCOP code=c.3.1.2	TM-score=0.773 to 3c96A SCOP code=c.3.1.2	TM-score=0.742 to 3c96A SCOP code=c.3.1.2