Template-based Modeling Results for CAIB_ECOLI

Submitted Primary Sequence

>Length 405
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCEEEECCCCCHHHHHCCCHHHHHHHCCCEEEEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEECCHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCHHHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCEECCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
554232242000210100000110000000100021002001021123212121102001012221100000012331130012003201000100201001121011300142112000000000132013211312001000200000010112232113010100000000000000000003133313111000000200010011000001111311231231211200001002011010000000121022004101112002023023023002201121032013101210132212200300230300003011032012111011220002021231330200100130331213122101121110110032011133102201322202145
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDHLPMPKFGPLAGLRVVFSGIEIAGPFAGQMFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLMETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPMPAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAMYEVMLRMGQYFMMDYFNGGEMCPRMSKGKDPYYAGCGLYKCADGYIVMELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTMDGRTCKGPNIMPKFKNNPGQIWRGMPSHGMDTAAILKNIGYSENDIQELVSKGLAKVED
1	MUSTER	1xk7A	0.938	0.960	3.603	threading_1	HDHLP-PKFGPLAGLRVVFSGIEIAGPFAGQF-AEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLE-TTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP-PAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAY-----EVLRGQYFDYFNGGECPRS--KGKDPYYAGCGLYKCADGYIVELVG-ITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTD-GRTCKGPNIP-KFKNNPGQIW-RGPSHG-DTAAILKNIGYSENDIQELVSKGLAKVED
2	SPARKS	1p5ha	0.223	0.951	8.484	threading_2	--------TKPLDGINVLDFTHVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWSLYFTMFNCNKRSIELDMKTPEGKELLEQMIKKADVMVENFGPGALDRMGFTWEYIQELNPRVILASVKGYAEGHA--NEHLKVYENVAQCSGGAAATTGFWDGPTVSGAALGDSNSGMHLMIGILAALEMRHKTGRGQKVAVAMQDAVLNLVRIKLRDQQRLGILAVPRGGNAGGGGQPGWMLKCKADSYVYFTIAANMWPQICDMIDKPEWKDDPAYNTFEGRV-----DKLMDIFSFIETKFADKDKFEVTEWAAQYGIPCGPVMSMKELAHDPSLQKVGTVVEVVDEIRGNHLTVGAPFKFSGFQPEIT-RAPLLGEHTDEVLKELGLDDAKIKELHAKQVV----
3	PROSPECT2	1p5hA	0.218	0.951	5.152	threading_3	--------TKPLDGINVLDFTHVQAGPACTQMMGFLGANVIKIERRGSGDKPNVDSLYFTMFNCNKRSIELDMKTPEGKELLEQMIKKADVMVENFGPGALDRMGFTWEYIQELNPRVILASVKGYAEGHA--NEHLKVYENVAQCSGGAAATTGFWDGPTVSGAALGDSNSGMHLMIGILAALEMRHKTGRGQKVAVAMQDAVLNLVRIKLRDQQRDNITSVPRGGNAGGGGQPGWMLKTDADSYVYFTIAANMWPQICDMIDKPEWKDDPAYNTFEGR-----VDKLMDIFSFIETKFADKDKFEVTEWAAQYGIPCGPVMSMKELAHDPSLQKVGTVVEVVDEIRGNHLTVGAPFKFSGFQPEIT-RAPLLGEHTDEVLKELGLDDAKIKELHAKQVV----
4	PPA-I	1xk7A	0.907	0.960	7.137	threading_4	HDHLPP-KFGPLAGLRVVFSGIEIAGPFAGQF-AEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKLE-TTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPP-AFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAY-----EVLRGQYFDYFNGGECPRS--KGKDPYYAGCGLYKCADGYIVELVG-ITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTD--GRTCKGPNIPKFKNNPGQIWRGPS--HGDTAAILKNIGYSENDIQELVSKGLAKVED
5	HHPRED-l	1xk7_A	1.000	0.951	7.109	threading_5	-DHLP-PKFGPLAGLRVVFSGIEIAGPFAGQ-FAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKL-ETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP-PAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIA-YEV----GQYF--DYFNGGE-CPR-SKGKDPYYAGCGLYKCADGYIV-ELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQT-DGRTCKGPNI-PKFKNNPGQIWRG-PSHG-DTAAILKNIGYSENDIQELVSKGLAKVE-
6	HHPRED-g	1xk7_A	1.000	0.953	5.804	threading_6	-DHLP-PKFGPLAGLRVVFSGIEIAGPFAGQ-FAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKL-ETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQP-PAFPYTADYFSGLTATTAALAALHKVRETGKGESIDIA-YEV----GQYF--DYFNGGE-CPR-SKGKDPYYAGCGLYKCADGYIV-ELVGITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQT-DGRTCKGPNI-PKFKNNPGQIWRG-PSHG-DTAAILKNIGYSENDIQELVSKGLAKVED
7	SP3	1xa3a	0.935	0.948	7.573	threading_7	LP----PKFGPLAGLRVVFSGIEIAGPFAG-QFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKL-ETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPP-AFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAYE-----VLRGQYFDYFNGGECPRS--KGKDPYYAGCGLYKCADGYIVELVG-ITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTD-GRTCKGPNIP-KFKNNPGQIW-RGPSHG-DTAAILKNIGYSENDIQELVSKGLAKV--
8	SAM-T99	2vjnA	0.225	0.946	5.050	threading_8	----------PLDGINVLDFTHVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWLQYFTMFNCNKRSIELDMKTPEGKELLEQMIKKADVMVENFGPGALDRMGFTWEYIQELNPRVILASVKGYAEGHA--NEHLKVYENVAQCSGGAAATTGFWDGPPVSGAALGDSNSGMHLMIGILAALEIRHKTGRGQKVAVAMQDAVLNLVRIKLRDQQRDNITSVPRGGNAGGAGQPGWMLKCKDASYVYFTIAANMWPQICDMIDKPEWKDDPAYNTFEGRV-----DKLMDIFSFIETKFADKDKFEVTEWAAQYGIPCGPVMSMKELAHDPSLQKVGTVVEVVDEIRGNHLTVGAPFKFSGFQPEI-TRAPLLGEHTDEVLKELGLDDAKIKELHAKQVV----
9	MUSTER	2vjnA	0.223	0.951	3.340	threading_9	--------TKPLDGINVLDFTHVQAGPACTQMMGFLGANVIKIERRGSGDMTRGWSLYFTMFNCNKRSIELDMKTPEGKELLEQMIKKADVMVENFGPGALDRMGFTWEYIQELNPRVILASVKGYAEGHA--NEHLKVYENVAQCSGGAAATTGFWDGPTVSGAALGDSNSGMHLMIGILAALEIRHKTGRGQKVAVAMQDAVLNLVRIKLRDQQRLGILAVPRGGNAGGAGQPGWMLKCDADSYVYFTIAANMWPQICDMIDKPEWKDDPAYNTFEGRVD-----KLMDIFSFIETKFADKDKFEVTEWAAQYGIPCGPVMSMKELAHDPSLQKVGTVVEVVDEIRGNHLTVGAPFKFSGFQPEIT-RAPLLGEHTDEVLKELGLDDAKIKELHAKQVV----
10	SPARKS	1xa3a	0.909	0.948	8.030	threading_10	----LPPKFGPLAGLRVVFSGIEIAGPFAG-QFAEWGAEVIWIENVAWADTIRVQPNYPQLSRRNLHALSLNIFKDEGREAFLKL-ETTDIFIEASKGPAFARRGITDEVLWQHNPKLVIAHLSGFGQYGTEEYTNLPAYNTIAQAFSGYLIQNGDVDQPP-AFPYTADYFSGLTATTAALAALHKVRETGKGESIDIAY-----EVLRGQYFDYFNGGECPRS--KGKDPYYAGCGLYKCADGYIVELVG-ITQIEECFKDIGLAHLLGTPEIPEGTQLIHRIECPYGPLVEEKLDAWLATHTIAEVKERFAELNIACAKVLTVPELESNPQYVARESITQWQTD--GRTCKGPNIPKFKNNPGQIWRGPS--HGDTAAILKNIGYSENDIQELVSKGLAKV--

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.952 to 1xk7A TM-score=0.948 to native SCOP code=c.123.1.1	TM-score=0.966 to 1xk7A TM-score=0.917 to native SCOP code=c.123.1.1	TM-score=0.873 to 1pqyA TM-score=0.859 to native SCOP code=c.123.1.1	TM-score=0.895 to 1pqyA TM-score=0.867 to native SCOP code=c.123.1.1	TM-score=0.965 to 1xk7A TM-score=0.912 to native SCOP code=c.123.1.1

Experimental Structure

Download 1xvuA

SCOP code=c.123.1.1