Template-based Modeling Results for BRNQ_ECOLI

Submitted Primary Sequence

>Length 439
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
CCCCCCHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHEEHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
5543232311000000000000000000000000221122000000000000000000100011322210320123003100000000000000000100100000010000100231100000000000000000001122003000200000000000000010001111212211321111000200020010000000000000002002322233132013100100000000000000000310120220033222011001000110011000000000000000000000000002001410212120000000000000010112201200110121001000000000002321432210000000000000001003201123100000320000221010000000000000001212233223334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
1	MUSTER	3gi9C	0.124	0.900	1.264	threading_1	MEKKLS---LWEAVSMAVGVMIGAS--IFFGVGAKIAGR---NLPETFILS-GIYALLVAYSYTKSNAGPIAFIHKIGDNIITGALSILLWMSYVI-----IALFAKGFALPLIAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLIT-PSYVIPDLAPSAVSGMIFASAIFF-----LSYMGFGVITNAS-----IENKKNVPRAIFISILIVMFVYVGVAISAIGN-LPIDELIKASEN---ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSL-FFERTEGLYITSALGVLFALLFMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQWITN------------RFVFYGI--IATFIGVLIFEIIYRKVTKRTFSNNMY
2	SPARKS	3ob6a	0.167	0.900	1.832	threading_2	DAHKVGPVTLMVSGNIM-----GSG--VFPANL-ASTGGIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRFGPFLGYQTNVLYWLACWIGAI----AMVVIGVGLSYFFPKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQST------LNVTLWGVESASVAAGV-VKNKRNVPIATIGGVLIAAVCYVLSTTAIM--GMIPNAALRVSAS---PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADTPVAGLIIVGILMIFQLSSISPGLVSSVSVITLVPYLYTCAALLLLG--HGHFGKARP-AYLAVTTIAFLYCIWAVVGSG--------------AKE---VMWSFVTLMVITAMYALNYNRLHKNPYP
3	PROSPECT2	1jdha	0.079	0.979	1.989	threading_3	AVNDEDQVVVNKAAVMVHQLSKKEASRMVSAIVRTQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMTNVKFLAITTDCLQILAESKLIILASGGPQALVNIMRTEKLLWTTSRVLKVL----SVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDATKQEGMEGLLGTLVQLDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGA-----IPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGIPLFVQLLYSPIENIQRVAAGVLCELPLTELLHSRNEGVAT
4	PPA-I	3l1lA	0.138	0.911	2.501	threading_4	-AHKVG---LIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGP-KMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAIQSTLNVTLWSFI--------------GVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIM--GMIPNAALRVSAS---PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAAIFARVAGLIIVGILMTIFQLSSATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTIAFLYCIWAVVGSG------------AKE---VMWSFVTLMVITAMYALNYNRLHKNPYP
5	HHPRED-l	3gia_A	0.104	0.916	2.743	threading_5	KNKKLSLWEAVSMA---VGVMIGASIFSIFGVGAKIAGRN---LPETFILSGIYALLVAKLGAKVSNAGPIAFIHKIGDNITGALSILLW--MSYVISIALFAKGFAGY-FLPLINAPTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHSYVIPDLA---P-SAVSGMIFAS----AIFFLSYMGFGVITNASEHIENPKK---NVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLVWSTEGLYIT-SALGVLFALLFNMEGVASITSAVFMVIYLF-VILSHYIL-ID--EVG--GRKEIVIFSFIVVLGVFLLLL-YY----QWIT-NR-F--VFYGIIATFIGLIFEIIYRKVTKRTFSNNM-
6	HHPRED-g	3l1l_A	0.158	0.863	3.305	threading_6	------AHKLIPVTLMVSGAIMGSGVFLLPANLAS-TGGIAI---YGWLVTIIGALGLSMMSFLPSPGGSYAYARRCGPFLGYQTNVLYWLAGNIAMVV------IGVGYLSYFFPIDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA--A---------------IQSTLNVTLWIGVESASVAAGVVKNPKNVPIATIGGVLI----AAVCYVLSTTAIMGMIPN-AALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAAPTPVAGLII-VGILMTIFQLKEFGLVSSVSVIFTLVPYLTCAALLLLGH-----GHFGKARPAYTTIAFLYCIWAVVG--------------SG--AKEVMWSFVTLMVITAMYALNYNRLHKNPYPLD
7	SP3	3ob6a	0.138	0.909	1.682	threading_7	DAHKVG---LIPVTLMVSGNIMGSG--VFPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGAIA--MVVIGVGY-LSYFFPKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVT----LWSFGVESASVAAGV-VKNPKR---NVPIATIGGVLIAAVCYVLSTTMGMIPNAALRVSAS---PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADFARVAGLIIVGILMTIFQLSSIGLVSSSVIFTLVPYLYTCAALLLLGHGHFGKARP---AYLAVTTIAFLYCIWAVVGS------------------GAKEVMWSFVTLMVITAMYALNYNRLHKNPY
8	SAM-T99	2xq1A	0.129	0.638	0.684	threading_8	------------------------------PPIGPLLLQDFKLIDTLSHFDRERIPERVVHAKGAGAYGVFEVTDDITDVCSAKFLDTVGKKT-------RIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNN---------TPIFFIRDPIKFPHFIHTQKRNPADPNM------------------------------FWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYKWYNSKGE---------------------------------------------------------------WVYVQVHFIANQGVHNLLDEEAGRLAGEDPDHSTRDLWEAIEKGDYPSWECYIQTMT--------------------LEQSKKLPFSVFDLTKVWPHKDFPLRHFGRFTLNENPKNYYAE
9	MUSTER	3l1lA	0.165	0.882	1.244	threading_9	-AHKVG---LIPVTLMVSGAIMGSG--VFPANLASTGG----IAIYGWLVT-IIGALGLSMVYAKSPGGSYAYARRFGPFLGYQTNVLYWLACWIGNIA--VIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGP-KMITRVQAVATVLALIPIVGIAVFGWFWFRGETYM-------AAIQSTLNVTLWSFI-------GVESASVAAGV-VKNKRNVPIATIGGVLIAAVCYVLSTTAIMGM--IPNAALRVSAS---PFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAA-PFARVAGLIIVGILMTIFQLSSATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFARPAYLAVTTIAFLYCIWAVVGSG--------------AKE---VMWSFVTLMVITAMYALNYNRLHKNPYP
10	SPARKS	3gi8c	0.109	0.918	1.762	threading_10	KNKKLSLWEAVSMAVGVMIIFSIFGVGAK------IAGRNETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKIGDNIITGALSILLWMSYVISIA--LFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNGSKAVGRAEFFIVLVALLILGLFIFAGLITIPSYVIPDLAPSAVSGMIFASAI--------FFLSYGFGVITNASEH-IENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN---ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAFKSTEGLYITSALGVLFALLFNMEGVASITSAVFMVIYLFVILSHYL---IDEVGGRK--EIVIFSFIVVLGVFLLLLYYQWITN-----------RFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNM

Predicted Tertiary Structure


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TM-score=0.706 to 2q6hA SCOP code=f.54.1.1	TM-score=0.587 to 2q6hA SCOP code=f.54.1.1	TM-score=0.691 to 2q6hA SCOP code=f.54.1.1	TM-score=0.695 to 1wa5B SCOP code=a.118.1.1	TM-score=0.700 to 2q6hA SCOP code=f.54.1.1