Template-based Modeling Results for BIOC_ECOLI

Submitted Primary Sequence

>Length 251
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCCEEECCHHHCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
55422231012000200310121020122002100310232421100000001010021023211100000002200110243122220000013101122100000000000210211110021002103340000001003211210120021134222013102131012003213120101200020320210020020000110132232321132102201311343312000001000000235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATVNKQAIAAAFGRAAAHYEQHADLQRQSADALLAMLPQRKYTHVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATATFDLAWSNLAVQWCGNLSTALRELYRVVRPKGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRILTRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE
1	MUSTER	2p35A	0.203	0.924	1.768	threading_1	----------------AQQYLKFEDERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVITGIDSDD-DLEKAADRLPNTNFGKADLATWKP-AQKADLLYANAVFQWVPDHLAVLSQLDQ-LESGGVLAVQPDNLQETHIAHETADGGPWKDAFKPLPPPSDYFNALSPKSSRVDVWHTVYNHPDADSIVEWVKGTGLRPYLAAAGEENFLADYTRRIAAAYPPADGRLLLRFPRLFVVAVKK
2	SPARKS	3ccfa	0.164	0.876	2.291	threading_2	-------------------------FVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAA-TIEKARQNYPHLHFDVADARNFRV-DKPLDAVFSN-ALHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLNPWYFPSIGEYVNILEKQGFDVTYAALFTTLAEGEFGANWIQFA--SAFLVGLTPDQQ-VQLIRKVEATLQDHQESWTADYRRIRIVSIKA
3	PROSPECT2	2p35A	0.198	0.924	2.975	threading_3	----------------AQQYLKFEDERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRVNVITGIDSDDDLEKAADR-LPNTNFGKADLATWKP-AQKADLLYANAVFQWVPDHLAVLSQL-DQLESGGVLAVQPDNLQEPTHIHETADGGPWKDAFKPLPPPSDYFNALSPKSSRVDVHTVYNHPKDADSIVEWVKGTGLRPYLAAAGEENREADYTRRIAAAYPPADGRLLLRFPRLFVVAVKK
4	PPA-I	2p35A	0.194	0.924	2.180	threading_4	----------------AQQYLKFEDERTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYNVITGIDSDDDLEKAADRL-PNTNFGKADLATWKP-AQKADLLYANAVFQWVPDHLAVLSQLDQ-LESGGVLAVQPDNLQEPTHIAHETADGGPKDAFKPLPPPSDYFNALSPKSRVDVWHTVYNHPKDADSIVEWVKGTGLRPYLAAAGEENREADYTRRIAAAYPPADGRLLLRFPRLFVVAVKK
5	HHPRED-l	3ccf_A	0.151	0.869	1.754	threading_5	-------------------------FVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAAT-IEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA-LHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNLGIALNPWYFPSIGEYVNILEKQGFDVTYAALFTTLAEEFG-ANWIQ-FASAFLVG-L-TPDQQVQLIRKVEATKLYHQESWTADYRRIRIVSIK-
6	HHPRED-g	3ccf_A	0.157	0.861	1.546	threading_6	-------------------------FVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVLGTDNAAT-IEKARQNYPHLHFDVADARNFRV-DKPLDAVFSNA-LHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALQALNPWYFPSIGEYVNILEKQGFDVTAALRPTTLAEGEFG-AWIQ-FASAFLV-----GLTPDQQIRKVEATLQYHQESWTADYRRIRIVSIKA
7	SP3	2avna	0.189	0.948	2.516	threading_7	----HKLRSWEFYDRIARAYDSYETPKWKLYHRLIGSFYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK-ELEVAREK-GVKNVVEAKAEDLPFPSGAFEAVLAGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQIEK----DAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSLEGFETVDIRGIGVEYPDERI---SEREETIFRLEQELSRDRNIIWKADHIFFVLKKKR
8	SAM-T99	3bkwA	0.219	0.765	2.863	threading_8	---------------------------------ALRALPEVGGLRIVDLGCGFGWFCRWAHEHGAYVLGLDLSEK-LARARAAGPDITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPI-YAPARPGWAIDRRTWPIDRYLVEGPRKTDWLAKG-------VVKHHRTVGTTLNALIRSGFAIEHVEEFCPTDAQITARPELAEELDRP-----------------
9	MUSTER	2avnA	0.205	0.932	1.737	threading_9	----HKLRSWEFYDRIARAYDSYETPKWKLYHRLIGSFLEKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK-ELEVAREK-GVKNVVEAKAEDLPFPSGAFEAVLAGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQI----EKDAWDQITRFLKTQTTSVGTTLF----SFNSYAFKPEDLDSLTVDIRGIGVEYPDERISER---EETIFRLEQELSRDRNIIWKADHIFFVLKKKR
10	SPARKS	2avna	0.193	0.948	2.246	threading_10	----HKLRSWEFYDRIARAYDSYETPKWKLYHRLIGSFYLKNPCRVLDLGGGTGKWSLFLQERGFEVVLVDPSK-ELEVAREK-GVKNVVEAKAEDLPFPSGAFEAVLAGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQIEK----DAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLDSLEGFETVDIRGIGVEYPDERISER---EETIFRLEQELSRDRNIIWKADHIFFVLKKKR

Predicted Tertiary Structure


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TM-score=0.647 to 1vl5A SCOP code=c.66.1.41	TM-score=0.653 to 2gluA SCOP code=c.66.1.41	TM-score=0.685 to 1vl5A SCOP code=c.66.1.41	TM-score=0.648 to 2gluA SCOP code=c.66.1.41	TM-score=0.661 to 2gluA SCOP code=c.66.1.41