Template-based Modeling Results for GUN_ECOLI

Submitted Primary Sequence

>Length 368
MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH
CHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCEEECCCCCCCCCCCCCEECCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH
32201000000000000002111212102201321023301000223242100020200000000102232002100200120112122332000000024332313121221000000000000010032132330021011002200322012122100000103111233311100001001100200131021011003101200220043100010010253412323233111100000000000011332223113002202211110252222222000221303231110000000000222111011122113322112100100000001000221020223020003123212338
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGMFSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGSMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTEKNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH
1	MUSTER	3qxfA	0.939	0.891	2.969	threading_1	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGFSALAA-NDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSA-SDGDVWAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG-SLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYW---VGPDSDPQKARL-NRFKPATF-TEKNGYPPEKVDVATGKAQGKGPVGFSAAL-PFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
2	SPARKS	3qxfa	0.945	0.891	7.176	threading_2	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGF-SALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW-AWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG-SLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYWV----GPDSDPQKARLNRFKPATF-TEKNGYPPEKVDVATGKAQGKGPVGFSAAL-PFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
3	PROSPECT2	3qxfA	0.918	0.891	4.258	threading_3	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGFSALA-ANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDV-WAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGL-GSLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVY----WVGPDSDPQKARLNRFKPATFTEKN-GYPPEKVDVATGKAQGKGPVGFSAA-LPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
4	PPA-I	3qxfA	0.909	0.891	4.741	threading_4	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGFSALAA-NDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSA-SDGDVWAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG-SLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVY----WVGPDSDPQKARLNRFKPATFTE-KNGYPPEKVDVATGKAQGKGPVGFSAAL-PFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
5	HHPRED-l	3qxf_A	1.000	0.891	7.621	threading_5	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG-FSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW-AWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGS-LLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVY-WVG--PDSDPQKAR-LNRFKP-ATFTEKNGYPPEKVDVATGKAQGKGPVGFSAA-LPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
6	HHPRED-g	3qxf_A	1.000	0.891	6.713	threading_6	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG-FSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW-AWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLGS-LLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVY-WVG--PDSDPQKAR-LNRFKP-ATFTEKNGYPPEKVDVATGKAQGKGPVGFSAA-LPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
7	SP3	3qxfa	0.951	0.891	6.890	threading_7	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYGF-SALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW-AWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG-SLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYWV-GPDSDPQ---KARLNRFKPATFT-EKNGYPPEKVDVATGKAQGKGPVGFSAA-LPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
8	SAM-T99	3qxfA	0.957	0.889	5.911	threading_8	-----------------------TWPAWEQFKKDYISQEGRVIDPSDARKITTSEGQSYG-FSALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKENSKWEVLDSNSASDGDVW-AWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG-SLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFSPDWVRYEKDKGWQLKAEKTLISSYDAIRVYW-VGPD--SDPQKARLNRKPATFTE---KNGYPPEKVDVATGKAQGKGPVGFSAA-LPFLQNRDAQAVQRQRVADNFPGSDAYYNYVLTLFGQGWDQHRFRFSTKGELLPDW--------
9	MUSTER	1cemA	0.191	0.910	2.393	threading_9	TKY-----GPTSIADNQSEVTAMLKAEWEDWKSKRITSNGRVQRDASTNYDTVSEGMGYGLLLAVCFNEQALFDDLYRYVKSHFN----GNGLMHWHIDANNNVTSHDGGDGAATDADEDIALALIFADKQWGSSNYGQEARTLINNLYNHCVEHG---SYVLKPGDRWG---GSSVTNPSYFAPAWYKVYAQYTGRWNQVADKCYQIVEEVKGTGLVPDWCTASG----TPASGQSYDYKYDATRYGWRTAVDYFGDQRAKANCDMLTKFFAR-DGAKGIVDGYTIQGSKISNNHNASFIGPVAAASMLNFAKELYRETVAVKDSEYYGYYGNSLRLLTLLYITGNF-----------PN--PLSDL
10	SPARKS	1wzza	0.249	0.829	5.310	threading_10	-------------------APDAVAQQWAIFRAKYLRPSGRVVDTGNGG-ESHSEGQGYGL-FAASAGDLASFQSW--WARTNLQHTN--DKLFSWRFL--KGHQPPVPDKNNATDGDLLIALALGRAGKRFQRPDYIQDAAIYGDVLN-----LTKAGPYVVLPGAVGFTKKDSVILNLSYYVPSLLQAFDLTDPRWRQVEDGIRLVSARFGQWRLPPDWLAVNRTGALSIASGWPPRFSYDAIRVPLYFYWAHLA----PNVLADFTRFWNNFGANA-LPGWVDLTTGASPYNAPPGYLAVAECTGLDSAGE-------LPTLDHAPDYYSAALTLLVYIARAEETI-------------------

Predicted Tertiary Structure


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TM-score=0.793 to 1wzzA TM-score=0.980 to native SCOP code=a.102.1.2	TM-score=0.795 to 1wzzA TM-score=0.984 to native SCOP code=a.102.1.2	TM-score=0.793 to 1wzzA TM-score=0.984 to native SCOP code=a.102.1.2	TM-score=0.792 to 1wzzA TM-score=0.980 to native SCOP code=a.102.1.2	TM-score=0.790 to 1wzzA TM-score=0.978 to native SCOP code=a.102.1.2

Experimental Structure

Download 3qxqA

SCOP code=a.102.1.2