Template-based Modeling Results for AVTA_ECOLI

Submitted Primary Sequence

>Length 417
MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHCCCCEEEECCHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH
551221022124211001002200200323100000011013212133102200220042232232002121241223002100010343121303130000011021001000100014213121320000101200000100112211210302021023231302031013211331000000112112011013310120020044110000111011100212210303311221000000001000100000000013300200110101010010000000001003323222101200220022103100100241023320201213000000010331311032003202220000001110122233223222100000001322102200310031023013335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIPEMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVIDNAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGIISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHKPEGAIFLWLWFKDLPITTKQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEAGVKILAEEIERAWAESH
1	MUSTER	3g7qA	0.788	0.894	2.526	threading_1	--------------GIT-------RLEDLNDGAILGGGNPAHIPA--QDYFQTLLTDVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRSTKK----VLFPLAPEYIGYADD-----LFVSARPNIELLPEGQFKYHVDFEHLHIGEETG-ICVSRPTNPTGNVITDEEL-KLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLW-NPNIILCSLSKLGLPGSRCGIIIANDKTITAIANNG----IISLAPGGGPACEIKRND-LLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKA-RGVLVPGHYFFPGLDKPWPHTH--QCRNYVPEPDKIEAGVKILAEEIERAWREG-
2	SPARKS	3if2a	0.410	0.983	2.828	threading_2	GKFSKFGQKFTQPTGISQ-LDDLGDALKSDQPVNLGGGNPAKIDAVNELFLETYKALGNDNDTGIISANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEKSVSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGYRVDFEALPALKEGRIGAICCSRPTNPTGNVLTDEE-AHLAEIAKRYDIPLIIDNAYGPF-PNIIYSDAHLNWDNNTILCFSLSKIGLPG-RTGIIVADAKVIEAVSAN-AVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD-YPLIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRSIAADEQTLIDGIKVIGEVVRELYDNK-
3	PROSPECT2	3if2A	0.420	0.976	3.978	threading_3	GKFSKFGQKFTQPTGI-SQLDDLGDALKSDQPVNLGGGNPAKIDAVNELFLETYKALGNDNDTGIISANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFVNEKSV--DKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGYRVDFEALEALKEGRIGAICCSRPTNPTGNVLTDEEA-HLAEIAKRYDIPLIIDNAYGP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-RTGIIVADAKVIEAV-SANAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDY-PLIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVS-DYQHAHECIRSIADEQTLIDGIKVIGEVVRELYDN-K
4	PPA-I	3g7qA	0.799	0.894	3.099	threading_4	---------------------GITRLEDLNDGAILGGGNPAHIPA--QDYFQTLLTDVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRSTKK----VLFPLAPEYIGYADD-----LFVSARPNIELLPEGQFKYHVDFEHLHIGEETG-ICVSRPTNPTGNVITDEEL-KLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPN-IILCSLSKLGLPGSRCGIIIANDKTITAIANNGIISLAPGGGPACEIK-----RNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKA-RGVLVPGHYFFPGLDKPWPHTHQ--CRNYVPEPDKIEAGVKILAEEIERAWREG-
5	HHPRED-l	1b5p_A	0.212	0.906	1.966	threading_5	MRLSRRVQAMKP-SATVAVN-AKALELQGVDLVALTAGEPDFDT--PEHVKEAARRALAQG-----KTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDP------GDEVIVLSPYWVSYPEMVRFAGGVVV---EVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFATGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTA----LGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA---------AFGHVRLSYATSEENLRKALERFARVL--------
6	HHPRED-g	1vp4_A	0.212	0.926	1.902	threading_6	VNLEKISKIGQN-KS--SIIREILKFAADKDAISFGGGVPDPETFPRKELAEIAKEIIE--KEYHYTLQYSTTEGDPVLKQQILKLLER-YGITLDEDNLIFTVGSQQALDLIGKLFLDDESYC------VLDDPAYLGAINA------FRQYLANFVVVPLEDDG-DLNVLERKLKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGLRYEGETVDPIFKIGGERVVLLNTFSKVLAPGLRIG-VAGSKEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKP-TIELYRRKRTV-LNALEEYFSDG-VKWVKSEGGLFIWLTLPE-GFDTWE-FEYAKRKKVFYVPGRVFKVY-----DEPSPS-RLSFCLPDEKIVEGIKRLREVVLEYGKEKH
7	SP3	3g7qa	0.761	0.894	2.833	threading_7	---------------------GITRLEDLNDGAILGGGNPAHIPAQ--DYFQTLLTDVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRSTKK----VLFPLAPEYIGYAD-----DLFVSARPNIELLPEGQFKYHVDFEHLHIGEET-GICVSRPTNPTGNVITDEELK-LDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLW-NPNIILCSLSKLGLPGSRCGIIIANDKTITAIANNG----IISLAPGGGPACEIKRNDLLRLSE-TVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPITTELLYQRLKA-RGVLVPGHYFFPGLDKPWPHT--HQCRNYVPEPDKIEAGVKILAEEIERAWREG-
8	SAM-T99	1wstA	0.249	0.914	3.042	threading_8	--------MLMKASEVRELLKLVE----TSDVISLAGGLPAPETFPVETIKKIAVEVLEEH--ADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDP------IVVEAPTYLAAIQAFKYYDPEFISIPL------DDKGMRVDLLEEKLKRVKIVYTVSTFQNPAGVTMSVDRRKKLLELANEYDFLIVEDGPYSELYSGEPTPPIKHFDYGRVIYLGTFSKILAPGFRIGWVAAHPHLIRKMEIAKQSIDLCTNTFGQAIAWKYVENGYLDEHI-PKIIEFYKPRRDAMLEALEEYMPE-GVEWTKPEGGMFVRVTLPE-GIDTKLMMERAVAKGVAYVPGEAFFVHRD-----KKNTMRLNFTYPEETIREGVRRLAETIKEEMKR--
9	MUSTER	3if2A	0.411	0.974	2.477	threading_9	GKFSKFGQKFTQ-PTGISQLDDLGDALKSDQPVNLGGGNPAKIDAVNELFLETYKALGNDNDSAIISANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGNEKS--VDKSILLPLTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGYRVDFEALENLPEGRIGAICCSRPTNPTGNVLTDEE-AHLAEIAKRYDIPLIIDNAYGP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-RTGIIVADAKVIEAVSANAVVN--APTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGD-YPLIHKPEGAIFLWLWFKDLPISTLDLYERLKAKGTLIVPSEYFFPGVDVS-DYQHAHECIRIAADEQTLIDGIKVIGEVVRELYDNK-
10	SPARKS	2zc0a	0.213	0.935	2.805	threading_10	MDYTKYAGRANWKGSALADVMKKASELQKKGLISLAAGDPDPELIPRAVLGEIAKEVLEKE---PKSVMYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITEN------PSYINTLLAFEQLGA------KIEGVPVDNDGMRVDLLEEKIQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNMRYEGGDIVPLKALDNGRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHLP--NAEFTKPIAGMFVMFFLPE-GADGISFANELMERGVVVVPGKPFYTD-----ESGKNAIRLNFSPSKEEIPIGIKKLAKLYKEKF----

Predicted Tertiary Structure


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TM-score=0.797 to 1gd9A SCOP code=c.67.1.1	TM-score=0.857 to 1wstA SCOP code=c.67.1.1	TM-score=0.855 to 1wstA SCOP code=c.67.1.1	TM-score=0.851 to 1wstA SCOP code=c.67.1.1	TM-score=0.790 to 1wstA SCOP code=c.67.1.1