Template-based Modeling Results for ATPD_ECOLI

Submitted Primary Sequence

>Length 177
MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHHHCEEEEEECCEEEEEEHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS
521112003200300010025232132022002001202323300200201203321021002101331231011002000322212002200210120111233201010000131233102300210143143202120200320010000201220010003110230032135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS
1	MUSTER	2a7uB	1.000	0.593	1.694	threading_1	-SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-----------------------------------------------------------------------
2	SPARKS	1abv_	1.000	0.593	2.659	threading_2	-SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-----------------------------------------------------------------------
3	PROSPECT2	1abv_	0.990	0.593	1.722	threading_3	-SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEA-----------------------------------------------------------------------T
4	PPA-I	2a7uB	1.000	0.593	2.036	threading_4	-SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-----------------------------------------------------------------------
5	HHPRED-l	2wss_S	0.223	0.836	7.701	threading_5	PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPK-AASLLNPYVKRSVKVKSLSD-TAKFSPLTSNLINLLAENGRLTNTPAVISAFST--SVHRGEVPCTVTTASALDETTLTELKTVLKSFLSQ----------------------KYVD-SAKTKIQKLSRA-R-
6	HHPRED-g	2wss_S	0.228	0.842	6.316	threading_6	PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPK-AASLLNPYVKRSVKVSLSD-TAKKFSPLTSNLINLLAENGRLTNTPAVISAFST--SVHRGEVPCTVTTASALDETTLTELKTVLKSFLSQ----------------------KYVD-SAKTKIQKLSRA-RE
7	SP3	1abv_	1.000	0.593	2.657	threading_7	-SEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEAT-----------------------------------------------------------------------
8	SAM-T99	2wssS	0.237	0.859	3.477	threading_8	PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKAASLL-NPYVKSVKVKSLSDTAKEKFSPLTSNLINLLAENGRLTNTPAVISAFSTSV--HRGEVPCTVTTASALDETTLTELKTVLKSFLS---------------------GQKYVD-SAKTKIQKLSRAREI
9	MUSTER	2wssS	0.222	0.864	1.564	threading_9	PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKAASLL-NPYVKRSVKVKSLSDTAEKFSPLTSNLINLLAENGRLTNTPAVISAFSTS--VHRGEVPCTVTTASALDETTLTELKTVLKSFLSKGQKYVDSAKTKI---------------------QKLSRAREI
10	SPARKS	2bo5a	0.216	0.627	2.360	threading_10	PVQIYGIEGRYATALYSAASKQNKLEQVEKELLRVGQILKEPKMAASLLNPYVKRSVKVKSLSDMTAKFSPLTSNLINLLAENGRLTNTPAVISAFSTMMSVHRGEVPCTV------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.793 to 2a7uB SCOP code=a.70.1.1	TM-score=0.589 to 2a7uB SCOP code=a.70.1.1	TM-score=0.738 to 2a7uB SCOP code=a.70.1.1	TM-score=0.740 to 2a7uB SCOP code=a.70.1.1	TM-score=0.793 to 2a7uB SCOP code=a.70.1.1