Template-based Modeling Results for ATPG_ECOLI

Submitted Primary Sequence

>Length 287
MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEEEEECCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV
54203213210210320220020000000010230121011022002002300010031223232312333323200000000221001000220022012103212432220100000230010022120200010111133221220100021002102323112000000201232211010120021322333323332231212131320021003200101001000110001101111102101310110032011111311212022100200101232
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAAAV
1	MUSTER	3fksG	0.237	0.927	2.887	threading_1	-ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAETK-----------NLDPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQ----PNADIVTIGDKIKMQLLRTPNNIKLSINGIGDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQS---PSFGKFEIDTDAN-VPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS-
2	SPARKS	2hldg	0.240	0.916	6.163	threading_2	-ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNA--------------ETKNKELIVAITSDKGLCGSIHSQLAKAVRRHLN----DQPNADIVTIGDKIKMQLLRHPNNIKLSINGIGDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNAKTIEQ---SPSFGKFEIDTDAN-VPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS-
3	PROSPECT2	2hldG	0.240	0.916	3.985	threading_3	-ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNA--------------ETKNKELIVAITSDKGLCGSIHSQLAKAVRRHLN----DQPNADIVTIGDKIKMQLRTHPNNIKLSINGIGDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNA---KTIEQSPSFGKFEIDTDAN-VPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS-
4	PPA-I	3fksG	0.221	0.930	3.551	threading_4	-ATLKEVEMRLKSIKNIEKITKTMKIVASTRLSKAEKAKISAKKMDEAEQLFYKNAE-----------TKNLDPKELIVAITSDKGLCGSIHSQLAKAVRRHLNDQ---PNADIVTIGDKIKMQLLRTHPNNIKLSINGIGDAPTFQESALIADKLLSVMKAGTYPKISIFYNDPVSSLSFEPSEKPIFNA---KTIEQSPSFGKFEIDTDAN-VPRDLFEYTLANQMLTAMAQGYAAEISARRNAMDNASKNAGDMINRYSILYNRTRQAVITNELVDIITGASS-
5	HHPRED-l	3oaa_G	1.000	0.990	6.167	threading_5	-AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAA--
6	HHPRED-g	3oaa_G	1.000	0.990	5.057	threading_6	-AGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRPYAETMRKVIGHLAHGNLEYKHPYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAEMKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAYDEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDTLLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQELTEIVSGAA--
7	SP3	1e79g	0.288	0.906	6.350	threading_7	-ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGS---------------LALYEKADIKTPLIIGVSSDRGLCGAIHSSVAKQMKSEAANL----KEVKIIGVGDKIRSILHRTHSQFLVTFKEVGRRPTFGDASVIALELL--NSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-----SAESMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL
8	SAM-T99	2qe7G	0.401	0.791	6.819	threading_8	--GMREIKRRIRSVKNTRQITKAMKMVAAAKLRRAQETAENARPYADKI--------------SHPMLEARPVKKTGYMVITSDRGLAGPYNANILRLVSKTIEERHQSKDEYVIFAVGRKGRDFFKKRGYPVVEEVTGISDTPSLTEIQDIAQSAIGMFADETFDKLTIFYNEFVSPIVQRPVEKQLLP-------------------------LTSLLPKYAETLIYSALLDAKASEFGARMTAMGNATDNATEMLETLTLQFNRA-------------------
9	MUSTER	1e79G	0.291	0.909	2.781	threading_9	-ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALY-----EKADIKTPEL---------IIGVSSDRGLCGAIHSSVAKQMKSEAANLK----EVKIIGVGDKIRSILHRTHSQFLVTFKEVGRRPTFGDASVIALELLNS--GYEFDEGSIIFNRFRSVISYKTEEKPIFSL-----DTISSAESMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL
10	SPARKS	1e79g	0.288	0.906	5.906	threading_10	-ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGS---------------LALYEKADIKTPLIIGVSSDRGLCGAIHSSVAKQMKSEAAN----LKEVKIIGVGDKIRSILHRTHSDFLVTFKEVGRRPTFGDASVIALELL--NSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-----SAESMSIYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL

Predicted Tertiary Structure


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TM-score=0.794 to 1e79G TM-score=0.761 to native SCOP code=c.49.2.1	TM-score=0.783 to 1e79G TM-score=0.754 to native SCOP code=c.49.2.1	TM-score=0.796 to 1e79G TM-score=0.733 to native SCOP code=c.49.2.1	TM-score=0.816 to 1e79G TM-score=0.727 to native SCOP code=c.49.2.1	TM-score=0.785 to 1e79G TM-score=0.754 to native SCOP code=c.49.2.1

Experimental Structure

Download 1fs0G

SCOP code=c.49.2.1