Template-based Modeling Results for ATP6_ECOLI


  Submitted Primary Sequence

>Length 271
MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
CCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
5543311121000100110312121111122312212000000000000000000000001000331232111101000100010010001201223232000000000000000000300022001100221111211221111211000000000000000100212000000120012211210010000001002100200100010000000010000000000110020000001000200110010000000000101211334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINIDSMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH
1MUSTER1c17M0.9930.5241.597threading_1----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKS-----------------------------LLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
2PROSPECT23kb9A0.0920.9671.481threading_2AVPPRLMPADKVEEYADGLCYTDLMAGYYLGAPD---------EVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLVAGFADSVRRLYAFLPATWNARFARHFHTVIEAYDREFPGVEEYLELRRLTFAHWIWSGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISLITHLEEAIGEVRRRVEECITEFLAVERDALRFADELADGTVRGKELSGAVRANVGNMRNWFSSVYWFHHESGYMVDSWDDN
3PROSPECT23a0oA30.0650.9671.412threading_3AVAKDPNHCGWAEFYEKSVERPVMPEPQPYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGR---------DDLLDASRKWLLAVAAKGATSRAYNDEAGFRVVVALAWGYDWLYDHLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIEAGEWLDYTVEFLATLYSPWAGTMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTGRLKLGYNVRQFAGVTGNGHYQWYFDHIKADAAFYNYGWWDLNFDDLVYRHDYPQV
4PROSPECT22bkuB20.0850.9521.379threading_4SASISTFVMDKLGQTMSVDENQLTLEDAQ------------SLQELQSNILTVLAAVILMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMWVIDYIKRTQQKRQL-SL
5SPARKS1c17m0.9860.5242.072threading_5----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKSL-----------------------------LSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
6PROSPECT22qfcA0.0720.9261.353threading_6LSENICHQSEVSRIESGAVYPSMDILQGIAAKLQIPIIHFYEVLIYSDIERKKQFKDQVIMLCKQKR---------------YKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQL----TGIDVYQNLYIENAIANIYAENGYLKKGIDLFLKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIELIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFFDILEMHAYKE-ALVNKISRL
7PPA-I1c17M0.9930.5242.266threading_7----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKS-----------------------------LLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
8HHPRED-l1c17_M1.0000.52410.848threading_8----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMK-----------------------------SLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
9HHPRED-g1c17_M1.0000.5249.385threading_9----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMK-----------------------------SLLSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------
10SP31c17m0.9860.5240.821threading_10----------------------------------------------------------------------------------------------HGKSKLIAPLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFILILFYSIKMKSL-----------------------------LSKPVSLGLRLFGNMYAGELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLS------

  Predicted Tertiary Structure

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TM-score=0.724 to 1c17M
SCOP code=f.18.1.1
TM-score=0.723 to 1hm7B
SCOP code=a.128.1.4
TM-score=0.723 to 1c17M
SCOP code=f.18.1.1
TM-score=0.579 to 1j0nA
SCOP code=a.102.3.2
TM-score=0.733 to 3ea5B
SCOP code=a.118.1.1