Template-based Modeling Results for PTIBC_ECOLI

Submitted Primary Sequence

>Length 485
MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN
54331220020003101023001000000000002022322122300330320100022231010001220120021002202132322321131321123002000200010002001000000002000100210111231110010010001000100000000000230412201000000000010002002312312100000010100311120000000000000022002310120042003000000000000001001001100100010010012100100100000000000000012000000011003103200000000000001000000001212333223100000000000101100010000312200000000000000000000010000000000000000122111000000000000000000000001133232332223244332222222332224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MAKNYAALARSVIAALGGVDNISAVTHCMTRLRFVIKDDALIDSPTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTLRRIGAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFFLPLMVAASAAIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYTYTVIPALVMTWCLSYIERWVDSITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGSAISALVYTIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSEIGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIASLISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFILTLLLGFEDIPVEEAAAQARKYQSVQPTVAKEVSLN
1	PROSPECT2	1b3ua	0.086	0.934	2.116	threading_1	TIYDEDEVLLALAEQLGGPEYVHCLLPPLESL---ATVEETVVRDKAVESHEHSPSDLEAHFVPLVKGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWLQKAVGPEITKTDLVPAFQNLMKDC--------------EAEVRAAASHKVKENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIIDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLSLCMAWLVDHVYAIREAAT-SNLKKLVEKFGKEWAHATMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAG----DPVANVRFNVAKSLQKIGVKPILEKLTQDQDVDVKYFAQ----------EALTVLSLA
2	SPARKS	3ipja	0.277	0.194	2.494	threading_2	NANKYNKIANELIKII-GEDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3	PPA-I	3ipjA	0.277	0.194	1.391	threading_3	NANKYNKIANELIKIIGE-DNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4	PROSPECT2	1jdha	0.080	0.955	2.045	threading_4	AVVNLIRAIPELTKLLND-EDQVVVNKAAVMVHQLSKKEASRSPQMVSAI------------VRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKPVDSVLFYAITTLHNLLLHAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAQESKLIILAPQALVNIMRTYTYEKLLWTTSRVLKVCSSNKPAIVEAGGMQAL------GLHLTDPSQRL-VQNCLWTLRNLSEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCGIEALVRTVLRAGDRED--ITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS
5	HHPRED-l	3ipj_A	0.301	0.192	5.129	threading_5	NANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGVNKVYAE-VEKMGLKTLSKKEQDEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6	PPA-I	3g61A1	0.079	0.703	1.091	threading_6	---------------------------------------------------------------------------VSVLTMFRYAG-----WLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQV--SFWCLAAGRQIHKIRQKFFHA--------IMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVTQQLMT------------------------------------------------------
7	HHPRED-g	3ipj_A	0.301	0.192	4.458	threading_7	NANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGVNKVYAE-VEKMGLKTLSKKEQDEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8	SP3	3ipja	0.277	0.194	2.347	threading_8	NANKYNKIANELIKI-IGEDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGIVNKVYAEVEKMGLKTLSKKEQDEL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9	SPARKS	3qnqa	0.125	0.773	1.260	threading_9	-------------------------------------------------------------------------------------RFLEKYVMPVAGKVAE--QRHLLAIRDGLVLTMPFLIIGSIFPGYSEFMASLFGKNWNVALGYPVSATFNIMALIAVFGIAYRLGEYYKVDAGALSLVTFLLATPFQVAYIMPGTKESILVDGVIPAALMGSQG-LFVAMIIAIISTEIYRFLVQKVPPAVTRSFA----ALIPGFIVVTVVWIIRLIFEHTTGSIHNVVGKLQEPLSILIAVILVHVLWACGIHLSLMDQNRIAFQAGQDVPNTITAQFFDLWATLALVVGMLLFARSQQLKSLGRLSIAPGI-FNINEMVTFGMPILLLIPFIVVPVVLTIVSYFAMEWGLVARPSGAATTPILFSGYLGSGGKISGVILQLVNFALAFVIYLPFLKIWDKQKIAEEKGEA-----------------
10	SAM-T99	3ipjA	0.301	0.192	5.084	threading_10	NANKYNKIANELIKIIG-EDNIISITHCATRLRVMVKDREIINDKKVEKVDEVKGVFFTSGQYQIILGTGVNKVYAEVEKM-GLKTLSKKEQDE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------L-------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.822 to 1b3uA SCOP code=a.118.1.2	TM-score=0.715 to 1b3uA SCOP code=a.118.1.2	TM-score=0.385 to 1f9nB SCOP code=a.4.5.3	TM-score=0.583 to 2q6hA SCOP code=f.54.1.1	TM-score=0.389 to 1b4aA SCOP code=a.4.5.3