Template-based Modeling Results for ARPB_ECOLI

Submitted Primary Sequence

>Length 632
MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTINFATSPIHTENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKXSIEKKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRDTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPLLPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQSQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQELLNKKLVMSILAMKIHDGEPGLYAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAQGTPALYIAMSKGNEDVVLSYISTLGAFAKKHSFSQHQLFTLLAAKNHDNMSAVHIAIHHKHYKTVETYYAAINAISQSLSFSADEIKTYL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTINFATSPIHTENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKXSIEKKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRDTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPLLPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQSQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQELLNKKLVMSILAMKIHDGEPGLYAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAQGTPALYIAMSKGNEDVVLSYISTLGAFAKKHSFSQHQLFTLLAAKNHDNMSAVHIAIHHKHYKTVETYYAAINAISQSLSFSADEIKTYL
CCCCCEEEEECCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCEEEEECCCCHHEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCEEEECCEEEECCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHCCCCCCHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHCCCCHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTINFATSPIHTENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKXSIEKKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRDTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPLLPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQSQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQELLNKKLVMSILAMKIHDGEPGLYAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAQGTPALYIAMSKGNEDVVLSYISTLGAFAKKHSFSQHQLFTLLAAKNHDNMSAVHIAIHHKHYKTVETYYAAINAISQSLSFSADEIKTYL
55431111211131212010223121222220220032003103223012011100023012104413320112110001001232333210000113412100002012132300210021033332223123201301310134332322010101000242221000010000100010133131302123101113102420122321202002422211010011310010001001202322220000201121111011020331232211000000013221110110122122110022012211313110232232001100210120022101200132122121111000000120123001100321331233201201212322110000000220112002100210310023221223100300223223301000000220133001000200220023221222100100112133111000000222122000100220211013130232100101312224101000000220132001000212110022221123101100113233210000000223123002000211220132231113103312
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQNDIIIRTHYKSPHRLHIDSDIPTPSSEPINQFARQLITLLDTSDLSSMLSYCVTQEFTANCRKISQNCYSTALFTINFATSPIHTENILITLHYKKEIISLLLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKXSIEKKTIHPTVNLNGSACFLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALLRHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQSVYGQLNYVVSVYDPNDTNVAVRDTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPLLPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQSQQLITLFKQLPILPEKEIIEIITAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLVDNHIIHEDNLVKLLQTKSANETPGLYISMLYGFDEIIDIFLNALTTPIAQELLNKKLVMSILAMKIHDGEPGLYAAMENNHPLCVTRFLSKINGIAFKYKLSKANIMDLLKGATAQGTPALYIAMSKGNEDVVLSYISTLGAFAKKHSFSQHQLFTLLAAKNHDNMSAVHIAIHHKHYKTVETYYAAINAISQSLSFSADEIKTYL
1	PROSPECT2	1b3ua	0.099	0.829	2.172	threading_1	AAADG---------------DDSL---------YPIAVLIDELRNEDVQLRLN--SIKKLSTIALALGVERT-------------------------RSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETV-----------------VRDKAVESLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPR----VSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDL------VPAFQNLMKDCEAEVSHKVKEFCENLSADCRENVIM---SQILPCIKELVSDANQHVKSALASVIMGLSPI--LGKDNTIEHLLP-------LFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLL---------PAIVELAEDAKWRVRLAIIEYMPLLAGQLG---------VEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPTVLRMAGDPVANVRFNVAKSLQKIGPILDTLQSEVKPIL
2	SPARKS	3utma	0.117	0.448	3.688	threading_2	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVTELLLKHGACVN---------------AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT---------------LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALQPQSHETALHCAVASLHKQVAELLLRKGAPLHVAAERAHNDVMEVLHALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSSLQGFTAAQMGNEA
3	PPA-I	3utmA	0.113	0.448	1.766	threading_3	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVTELLLKHGACVN---------------AMDLWQFTPLHEAASKNRVEVCSLLLSHGADPT---------------LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAKQPQSHETALHCAVASLHKQVAELLLRKGAPLHVAAERAHNDVMEVLHKHGSLGQTALHRAALAGHLQTCRLLLSYGSDPSSLQGFTAAQMGNEA
4	PROSPECT2	1jdha	0.091	0.769	2.155	threading_4	AVVNL----------------IRLNDEDQVVVNKAAVMVHQLSKKEASRHAISPQMVSAIVRTMQN-------------------------------------------TNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVK-------------MLGSPVDSV--LFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK--------------------TNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYT------------YEKLLWTTSRVLKVLSVCSSNKPAIVEAG--GMQALGLHLTDPSQRLVQNCLWTLRN-----LSDAATKQEGMEGLLGTLVQLDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRL---HYGLPVVVKLLHPPSHWPLIKATVGLIRNL---ALCPANHAPLRE---QGAIPRLVQLLVRAHQDTMEEIVEGCTGALHILARDVHNRIVIRG---LNTIPLFVQLLYSPIENIQRVAA----GVLCELAQDKEAAEAIEA---EGATAPLTELLHSRNEGVATYAAAV--------------LFRMS
5	HHPRED-l	2fo1_E	0.146	0.337	2.108	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TN---P-E-ESPIKLHTEAAGSY-----------A-ITEPITRESVNIIDPHNRTVLHWIASNSSAEKSEDLIVHEAKEADV------------NA-DCDENTPL-LAVLARRRRLVAYL-KAGADP---------------TIYNKSERSALHQAAANRDFG--VY-LNG-TAL-IVAHNEGRDQVKLLVSEKYKGRTALHYAAQVSN-PIVKYLVGETPI-LAAQEGRIEVV-YLIEAVDATDHTARQLAQANNHHNIVDIFDRCR------------------
6	PROSPECT2	1qgra	0.078	0.957	2.147	threading_6	MPGNSLQIKNSLTSKDPLHTLGTETYRPSNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSAIIQGMRKEEPSNNVKLTYMGPALFAITIEAMKSDIDEVALQGIEFWSN----VCDEEMDLAIEASEAAEQGRPPEHTSKFYAQDENDDDDDWNPCKAAGVCLLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIKDPSLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQ---SLLCATLQNVLRKVQHQDALQISDV-------VMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPF------LGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVNLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVV---LNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLDHIAGDEDHTDGVVACA----AGLIGDLCTAFGKDVLKLVEARPMIHELL
7	SP3	3utma	0.117	0.448	3.514	threading_7	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVH---------AKDKGGLVPLHNACSYGHYEVTELLLKHGACVN---------------AMDLWQFTPLHEAASKNRVEVCSLLLSHG------ADPT---------LVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLFKQPQSHETALHCAVASLHKQVAELLLRKGAPLHVAAERAHNDVMEVLHALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSSLQGFTAAQMGNEL
8	HHPRED-g	1n11_A	0.116	0.625	2.352	threading_8	-------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQRGASPNSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAA---------------------------------RIGHTNMVKLLLENNANPNLATTAGHTPLHIAARE---------------GHVETVLALLEKEASQ--------ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA-GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE---------SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG---------------NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA---------------TTRMGYTPLHVASHYGNIKLVKFLLQHQADV---------------NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE---------------VSSDGTTPLAIAKRLGYISVTDVLKVVTDETS----FVL----HRM
9	SAM-T99	1n11A	0.095	0.566	4.426	threading_9	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPLHVASF---------MGHLPIVKNLLQ----------RGASPNVSNVKVETPLHMAARAGHTEVAKYLLVNAKAKDDQTPLHCAARIGHTNMVKLLL------ENNANPNLATTAGHTPLHIAAREGHV---ETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA-GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH---------SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN---------------AESVQGVTPLHLAAQEGHAEMVALLLSKQANGNL---------------GNKSGLTPLHLVAQEGHVPVADVLIKGYTPLHVASHYGNIKLVKFLLQHTKLGYSPLHQAAQQGHTDIVTLLLK------NGASPNEV---------SSDGTTPLAIAKRLGYISVTDVL----------------------
10	SPARKS	2xaia	0.147	0.323	3.336	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WSPMHEAAIHGHQLSLRNLISQGWAVN---------IITADHVSPLHEACLGGHLSCVKILLKHGAQVN---------------GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ----------------PESDLASPIHEAARRGHVECVNSLIAYGGNI---------------DHKISHLGTPLYLACENQQRACVKKLLESGADVN----------------QGKGQDSPLHAVARTASEELACLLMDFGADTQNAEGKRPVELVPPE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.946 to 1b3uA SCOP code=a.118.1.2	TM-score=0.792 to 1b3uA SCOP code=a.118.1.2	TM-score=0.560 to 2qyjA SCOP code=k.37.1.1	TM-score=0.780 to 3ea5B SCOP code=a.118.1.1	TM-score=0.565 to 2qyjA SCOP code=k.37.1.1