Template-based Modeling Results for ARPA_ECOLI

Submitted Primary Sequence

>Length 728
MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR
CCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECHHHHHHHHHHHCCCCCCHHHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHEECCCCCCCCEEEEEECCCCCCCEEEEEECCCHHHHCCCEEEECCCCCCCCCCCHHHCCCCCHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHCCHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MITRIPRSSFSANINNTAQTNEHQTLSELFYKELEDKFSGKELATPLLKSFSENCRQNGRHIFSNKDFVIKFSTSVLQADKKEITIINKNENTTLTQTIAPIFEKYLMEILPQRSDTLDKQELNLKSDRKEKEFPRIKLNGQCYFPGRPQNRIVCRHIAAQYINDIYQNVDYKPHQDDYSSAEKFLTHFNKKCKNQTLALVSSRPEGRCVAACGDFGLVMKAYFDKMESNGISVMAAILLVDNHALTVRLRIKNTTEGCTHYVVSVYDPNVTNDKIRIMSESKENIKHYSLMDFMNVDYSLLKWSNDHVINQSVAIIPALPKEQLLMLKGSVDEITPPLSPATMNLLMAIGQNHQLTQLMIQLQKMPELHRTEMLTAYNSINLPGLYLAINYGNADIVETIFNSLSETGYEGLLSKKNLMHILEAKDKNGFSGLFLAISRKDKNVVTSILNALPKLAATHHLDNEQVYKFLSAKNRTSSHVLYHVMANGDADMLKIVLNALPLLIRTCHLTKEQVLDLLKAKDFYGCPGLYLAMQNGHSDIVKVILEALPSLAQEINISASDIVDLLTAKSLARDTGLFMAMQRGHMNVINTIFNALPTLFNTFKFDKKNMKPLLLANNSNEYPGLFSAIQHKQQNVVETVYLALSDHARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILNTLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR
1	MUSTER	1n11A	0.168	0.482	1.626	threading_1	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVET------PLHMAARAGHTEVAKYLLQN----------AKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN---------------PNLATTAGHTPLHIAAREGHVETVLALLEKEASQ---------------ACMTKKGFTPLHVAAKYGKVRVAELLLERTPLHVAVHHNNLDIVKLLLHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANA---------------ESVQGVTPLHLAAQEGHAEMVALLLSKQAPLHLVAQEGHVPVADVLIKHTRMGYTPLHVASHYGNIKLVKFLLQHQADV---------------NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE
2	PROSPECT2	1qbkb	0.077	0.968	2.333	threading_2	QYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGFIKSECLNNIGDSSPLIRATVGILIASKGELQNWPDLLPKLCSLYNTCEGAFGALQKICEDSAEILDSDRPLNIIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALLHIDSFTENLFALAGDEEPEVRKNVCRALVLLEVRMD--------RLLPHHNIVEYLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKGDVEEDETI---PDSEQDIRPRFHRSRTVAQQHDEDDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCQGIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQP-------PDTYLKPLTELLKRILDSNKRVQEAACSAFATLEEEACTEAYILDTLVFAFSKYQHKNLLILY-----DAIGTLADSVGHHLPEYIQLPPLIQKWNLKDEDKDLFPLLECLSSGFLPYCEPVYQRCVNLVQPDKDFIVALDLLSGLAEGLGGNIEQLVARSNIFALLGDLTKACFQHVKPCIADFPILGTISIQGIEQPYIQLVEIINRPNENTAITIGRLGYVCPQEVAPLQQFIRPWCTSLRNIRDNEEKDSAFVNPSGVIQDFIFSWINPKDDLRDFCKILHFKNQVGDENWRRFSDQFPYG
3	SPARKS	1n11a	0.162	0.484	4.471	threading_3	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQ------RGASPNVSNVKVETPLHMAARAGHTEVAKYL---------LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPN---------------LATTAGHTPLHIAAREGHVETVLALLEKEALHVAAKYGKVRVAELLLERAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS---------------PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN---------------AESVQGVTPLHLAAQEGHAEMVALLLSKQTPLHLVAQEGHVPVADVLIKHTRMGYTPLHVASHYGNIKLVKFLLQHQAD---------------VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE
4	PROSPECT2	1n11a	0.168	0.508	2.959	threading_4	L-------------------------------------------TPLHVASFMGHLPI------------------------------------------------VKNLLQRGAS----------------------------PNVSNVKVETPLHMAARA--------------------------------------------------------------------------------GHTEVAKY---------------------------------------------------------------------------LLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLEN---------NANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC---------------MTKKGFTPLHVAAKYGKVRVAELLLERDAH---------------PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS---------------PHSPAWNGYTPLHIAAKQNQVEVARSLLQY------GGSAN---------AESVQGVTPLHLAAQEGHAEMVALLLSKLTPLHLVAQEGHVPVADVLIKTTRMGYTPLHVASHYGNIKLVKFLLQHQAD---------------VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE
5	PPA-I	1n11A	0.183	0.459	2.672	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQRG---------ASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN---------------AKAKDDQTPLHCAARIGHTNMVKLLLENNALHIAAREGHVETVLALLECMTKKGFTPLHVAAKYGKVRVAELLLERDPLHVAVHHNNLDIVKLLLHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE---------------SVQGVTPLHLAAQEGHAEMVALLLSKQTPLHLVAQEGHVPVADVLIKHTRMGYTPLHVASHYGNIKLVKFLLQHQADV---------------NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE
6	HHPRED-l	1n11_A	0.213	0.412	2.343	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQRGASPN---------------VSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN---------------AKAKDDQTPLHCAARIGHTNMVKLLLEFTPLHVAAKYGKVRVAELLLEAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWQNQVEVARSLNAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKEGHVPVADVLIKTTRMGYTPLHVASHYGNIKLVKFL---LQHQADV------------NAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLTDETV-
7	HHPRED-g	1n11_A	0.153	0.530	2.459	threading_7	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQ---RGASPNVSNVKVE----------------------TPLHMAARA----GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER---------DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA---------------WNGYTPLHIAAKQNQVEVARSLLQYGGS---------------ANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN---------------GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT---------------TR------------------------------------------------MGYTPLHVASHYGNIKLVKFLLQHQADVNAK---------------TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE
8	SP3	3utma	0.148	0.427	4.003	threading_8	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSAKAVLTGEYKKDELLEAARSGNEEKLMAL--------LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA---------------KDKGGLVPLHNACSYGHYEVTELLLKHGAC---------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD---------------PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLFKQPQSHETALHCAVASLHKQVAELLLRKGANVN---------------EKNKDFMTPLHVAAERAHNDVMEVLHKHGAK---------------MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSES---
9	SAM-T99	1n11A	0.159	0.526	5.010	threading_9	----------------------------------------------------------------------------------------------------------------------------------------------------LTPLHVASFMGHLPIVKNLLQRGASPNVSN---------------------------------------------------VKVETPLHMAARAGHTEVAKYLLQNKAKVNAK---------------------------------AKDDQTPLHCAARIGHTNMVKLLL----ENNANPNLATTA-----GHTPLHIAAREGHVETVLALLEKEAS---------QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP---------------NAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPH---------------SPAWNGYTPLHIAAKQNQVEVARSLLQYGGS---------------ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG---------------NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM---------------VDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD---------------VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK-----
10	MUSTER	3utmA	0.148	0.426	1.436	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPSAKAVLTGEYK------KDELLEAARSGNEEKLMALL--------TPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD---------------VHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC---------------VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGA----------------PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLAKQPQSHETALHCAVASLHKQVAELLLRKGANVN---------------EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKM---------------NALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSES---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.571 to 1n11A SCOP code=d.211.1.1	TM-score=0.840 to 1qbkB SCOP code=a.118.1.1	TM-score=0.578 to 1n11A SCOP code=d.211.1.1	TM-score=0.556 to 1n11A SCOP code=d.211.1.1	TM-score=0.594 to 1n11A SCOP code=d.211.1.1