Template-based Modeling Results for AROK_ECOLI


  Submitted Primary Sequence

>Length 173
MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN
CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECCCCEECCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN
55433100000020001000020002203120000021013313130120032222300231122002201332100000110001143002102120000002010320121033233212232322132102100220130033001010203331031002201211345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAKVVANQIIHMLESN
1MUSTER3trfA0.4460.9713.318threading_1L---TNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQKMRRPLFIK-NNSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIKQ-
2SPARKS3trfa0.4460.9714.160threading_2---LTNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQEMRRPLFIKN-NSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIKQ-
3PROSPECT23trfA0.4460.9713.450threading_3L---TNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIKGEMRRPLFIKN-NSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIK-Q
4PPA-I3trfA0.4460.9713.382threading_4---LTNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQEMRRPLFIKN-NSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIKQ-
5HHPRED-l1kag_A1.0000.9131.976threading_5--EKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLART------PLLHVETPPREVLEALANERNPLYEEIADVTI-----SAKVVANQIIHMLE--
6HHPRED-g2iyv_A0.3630.9712.564threading_6---APKAVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDVVRAALADHDGVLSLGGGAVTSPGVRAALA-GHTVVYLEISAAEGVRRTGGNTVRPLLAG-PDRAEKYRALMAKRAPLYRRVATMRVDTNRRNPGAVVRHILSRLQVP
7SP33trfa0.4460.9714.308threading_7L---TNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQEMRRPLFIKN-NSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIKQ-
8SAM-T993trfA0.4490.9654.020threading_8---LTNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEIEKRTGADIAWIFEMEGEAGFRRREREMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASIDTQLKRIGQKGERPLFIK-NNSKEKLQQLNEIRKPLYQAMADLVYPTDDLNPRQLATQILVDIK--
9MUSTER1kagA0.9870.9133.005threading_9--EKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLAR------TPLLHVETPPREVLEALANERNPLYEEIADVTIS-----AKVVANQIIHMLE--
10SPARKS3vaaa0.2940.9833.905threading_10--AMVRIFLTGYMGAGKTTLGKAFARKLNVPFIDLDWYIEERFHKTVGELFTERGEAGFRELERNMLHEVAEFENVVISTGGGAPCFYDNMEFMNRTGKTVFLNVHPDVLFRRLRIAKQRPILQGKEDLMDFIIQALEKRAPFYTQ-AQYIFNADELEDRWQIESSVQRLQEL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.852 to 1kagA
TM-score=0.888 to native
SCOP code=c.37.1.2
TM-score=0.855 to 1kagA
TM-score=0.891 to native
SCOP code=c.37.1.2
TM-score=0.851 to 1kagA
TM-score=0.888 to native
SCOP code=c.37.1.2
TM-score=0.849 to 1kagA
TM-score=0.885 to native
SCOP code=c.37.1.2
TM-score=0.851 to 1kagA
TM-score=0.888 to native
SCOP code=c.37.1.2

  Experimental Structure

Download 1kagA
SCOP code=c.37.1.2