Template-based Modeling Results for AROG_ECOLI

Submitted Primary Sequence

>Length 350
MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
CCCCCCCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCEEECCCCCCCEEEHHHHHHHHHCCCEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
53342331202102201102101430202330021012013101400323232000000101131220012002101201231332000000000223212221300021231221210220020013000101301010001001110030000000000001222222112210220200000211220102000000100112100000142110000102212100000100332111030012013003512121100000111212322320130012002102212310000001022232222132232122120110110013101200220121133345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
1	MUSTER	3tqkA	0.542	0.954	3.473	threading_1	--------NIKKEKVLIPAEVLIQDIPLLKTSFETVRKSRKEIANIIHGNDDRVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKD-ILIIRVYFEKPRTTIGWKGFINDPDLDNSYNINKGLRLARNLLSDLTN-GLPCATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSATYPHHFLSTTKSGSTAIFATKGNQNGHVILRGGAGPNFSKEHVDDCIAKLKKADINTK-VIDCSHGNSQKDHSKQISVLADICEQIKHSN-DIF-GVIESNLVAGNQDI-NKKPLTYGQSVTDKCVDFEETVKL--ELAEAVQVRRG
2	SPARKS	1gg1a	1.000	0.969	9.818	threading_2	------DLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSL----PLAYGKSITDACIGWEDTDALLRQLANAVKARR-
3	PROSPECT2	3tqkA	0.548	0.954	5.479	threading_3	--------NIKKEKVLIPAEVLIQDIPLLKTSFETVRKSRKEIANIIHGNDDRVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKDI-LIIRVYFEKPRTTIGWKGFINDPDLDNSYNINKGLRLARNLLSDLTN-GLPCATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSATYPHHFLSTTKSGSTAIFATKGNQNGHVILRGGASPNFSKEHVDDCIAKLKKADINT-KVIDCSHGNSQKDHSKQISVLADICEQIKHSN-DIFGVI-ESNLVAGNQDI-NKKPLTYGQSVTDKCVDFEETVKLE--LAEAVQVRRG
4	PPA-I	3tqkA	0.539	0.954	5.479	threading_4	--------NIKKEKVLIPAEVLIQDIPLLKTSFETVRKSRKEIANIIHGNDDRVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKD-ILIIRVYFEKPRTTIGWKGFINDPDLDNSYNINKGLRLARNLLSDLTN-GLPCATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSATYPHHFLSTTKSGSTAIFATKGNQNGHVILRGGAGPNFSKEHVDDCIAKLKKADINT-KVIDCSHGNSQKDHSKQISVLADICEQIKHSNDIF--GVIESNLVAGNQDI-NKKPLTYGQSVTDKCVDFEETVKL--ELAEAVQVRRG
5	HHPRED-l	1n8f_A	0.997	0.977	-0.003	threading_5	-------LRIKEIKELLPPVALLQKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARR-
6	HHPRED-g	1n8f_A	0.997	0.980	1.811	threading_6	-------LRIKEIKELLPPVALLQKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
7	SP3	1gg1a	1.000	0.969	9.553	threading_7	------DLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTVGWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFKKQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSL----PLAYGKSITDACIGWEDTDALLRQLANAVKARR-
8	SAM-T99	1kflA	1.000	0.977	7.421	threading_8	-NYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIV-RVYFEKPRTTVGWKGLINDPH-DNSFQINDGLRIARKLLLDINDSGLPAAGEFLD-ITPQYLADL-SWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQV-IDFSHANSSKQFKKQ-DVCADVCQQIAGGEKAIIGV-VESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
9	MUSTER	1kflA	0.980	0.977	3.320	threading_9	-NYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIHKILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVR-VYFEKPRTTVGWKGLINDPH-DNSFQINDGLRIARKLLLDINDSGLPAAGEFLDI-TPQYLADL-SWGAIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHSAIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPA-QVIDFSHANSSKQFKKQ-DVCADVCQQIAGGEKAI-IGVVESHLVEGNQSLESGEPLAYGKSITDACIGWEDTDALLRQLANAVKARRG
10	SPARKS	1jcxa	0.161	0.711	3.103	threading_10	---------------------------------------------------EKFLVIAGPCAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSISFRGH----------GLEYGVKALRKVKEEF---GLKITTDIHESWQAEPVAEVADIIQIPAFLCRQTDLLLAAAKTGRAVNVKKGQFLA----PWDTKNVVE--------------KLKFGGAKEIYLTERGTTFG-YNNLVVDF--RSLPIMKQWAKVIYDATHSVQLPGMREF--IFPLIRAAVAVG---CDGVFMETHPEPEKALSDASTQLP-----------LSQLEGIIEAILEIREVASK

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.952 to 1kflA TM-score=0.971 to native SCOP code=c.1.10.4	TM-score=0.950 to 1kflA TM-score=0.970 to native SCOP code=c.1.10.4	TM-score=0.962 to 1kflA TM-score=0.992 to native SCOP code=c.1.10.4	TM-score=0.951 to 1kflA TM-score=0.971 to native SCOP code=c.1.10.4	TM-score=0.948 to 1kflA TM-score=0.970 to native SCOP code=c.1.10.4

Experimental Structure

Download 1gg1B

SCOP code=c.1.10.4