Template-based Modeling Results for ARND_ECOLI

Submitted Primary Sequence

>Length 296
MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
CCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCHHHHHHHHHCCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHCCCHHHHHHHHHHHHHHHCCCEEEEHHHHCHHHCCCCCEEECCCCCCCEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
43210020001112113200120031024220200000011222102001210223101201312112011110111010021320021002002201430100000000000213022233310121022003001300122110000211301330020122131211010211110212132231100100010001131112302231000000110142210000000120210200300120032014220200001201232022020010202123010002422339
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDNMGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHEVGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIEAKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKAEDFNGWLLNRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVVRGNIAGREGWLGCQQIAGSR
1	MUSTER	3rxzA	0.216	0.780	1.454	threading_1	KTAVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFVP--------------------------------------------GYTAHRHPEPIRSIARGHEIAHHGYLHE----SLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDG--SLVELPVSWALDDWQQGLIETPAKAIELWRAELNDIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKL------TPR------TLTRPEL
2	SPARKS	3rxza	0.212	0.780	3.711	threading_2	TCAVAFTFDVDAEYGPLVGVPRLLGILDEFNVPGTFFVP--------------------------------------------GYTAHRHPEPIRSIARGHEIAHHGYLHE----SLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDG--SLVELPVSWALDDWQQGLIETPAKAIELWRAELNAIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKLTPRTLTPELT------------
3	PROSPECT2	3rxzA	0.224	0.784	2.177	threading_3	LTPVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFV------PGYTAHR--------------------------------------HPEPIRSARAGHEIAHHGYLH----ESLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWENWH--TPKLLAEFGFLYDSTLDSDHPYE--LAVGDGSLVELPVSWALDDWQQGLIETPAKAIELWRAELRDIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDV-WVAGSQIAEHVRAQKLTPRTLTRPE-----------LT
4	PPA-I	3rxzA	0.211	0.784	2.426	threading_4	TCAVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFVP--------------------------------------------GYTAHRHPEPIRSIARGHEIAHHGYLHE----SLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDGSL--VELPVSWALDDWQQGLIETPAKAIELWRAELNDIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKLTPRTLTRPELT-----------
5	HHPRED-l	2c1i_A	0.153	0.662	4.246	threading_5	QKVVALTFN----DGPNATTPQVLETLAKYDIKATFFVLGK-------------------------------------------NVSGNEDLVKRIKSEGHVVGNHSWSHPI----LSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDI---RNSLDLSF--------------------------IMWDVDSLDWKSKNEASILTEIQHQVAN---GSIVLMHDIH--SPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE---------------
6	HHPRED-g	3s6o_A	0.142	0.855	4.855	threading_6	RARVAVQFVLNYEEGGENCV------LHGDPASEQFLSEIVGESIYEYGSRAGVWRILR----------EFDKRGLPLTVFGVGMAIERHPELARAFELGHEIACHGWRWIHYQ----DMTPEREAEHMRLGMEAIERVTGVRPLGWYT--GRDSPNTHRLVAEYGFLYDSDHYGDDPFWMDVGGASVPQLIVPYTLDANDMRFATGNTADDAFDVLYEEGDEAPKMMSIGMHCRLLGRPRFRALQRFLDHIEHDRVWVARRVEIARHWREHHPY---------------------
7	SP3	3rxza	0.211	0.784	3.783	threading_7	VSAVAFTFDVDAESGPLVGVPRLLGILDEFNVPGTFFV------PGYTAHR--HPEPIRSIAR-----------------------------------AGHEIAHHGYLH----ESLVGADEDTERKILTRGIEALEEVAGVHPVGYRAPWE--NWHTPKLLAEFGFLYDSTLDSDHPYELAVGDG--SLVELPVSWALDDWQQYCFVTPAKAIELWRAELNAIGGAWVLTNHPFLSGRGRAAALREFIAEVCADDVWVAG-SQIAEHVRAQKLTPRTLTPELT------------
8	SAM-T99	3qbuA	0.186	0.764	4.317	threading_8	EILVAYGVDIDAVFAGEVGIPRLLKLFKKYHLPATWFVP--------------------------------------------GHSIETFPEQMKMIDAGHEVGAHGYSHEN----PIAMSTKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHFTPMKPLIRGVETNLVEIPANWYLDDLPPMMFIKKGQMWIDQFDWVYRDYAVFSMTIHPDVSARPVLLMHEKIIEHINKEGVRWVTFNEIADDFLKRNP----------------------
9	MUSTER	2c79A	0.185	0.676	1.342	threading_9	-KLVALTFDDGPD---NVLTARVLDKLDKYNVKATFMVV-------------------------------------------GQRVNDSTAAIIRRMVNGHEIGNHSWSY----SGMANMSPDQIRKSIADTNAVIQKYAGTTPKFFRPPNLETSPTLFNNV--------------------------DLVFV-GGLTANDW--IPSTTAEQRAAAVINGVRDGT---IILLHDVQEPHPTPEALDIIIPTLKSRGYEFVTLTELFTLKVPIDP------SVK-------RMYNSV
10	SPARKS	3qbua	0.185	0.767	3.607	threading_10	EILVAYGVDIDALFAGEVGIPRLLKLFKKYHLPATWFV--------------------------------------------PGHSIETFPEQMKMIDAGHEVGAHGYSHE----NPIAMSTKQEEDVLLKSVELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNTPYYPLIRGVETNLVEIPANWYLDDLPPFGFVSPRDIGQMWIDQFDWDYAVFSMTIHPDVSARQVLLMHEKIIEHINHEGVRWVTFNEIADDFLKRNPR---------------------

Predicted Tertiary Structure


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TM-score=0.704 to 2c1gA SCOP code=c.6.2.3	TM-score=0.706 to 2c1gA SCOP code=c.6.2.3	TM-score=0.702 to 2c1gA SCOP code=c.6.2.3	TM-score=0.697 to 2c1gA SCOP code=c.6.2.3	TM-score=0.704 to 2c1gA SCOP code=c.6.2.3