Template-based Modeling Results for ARNB_ECOLI

Submitted Primary Sequence

>Length 379
MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCEECCEECCCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ
5522011131102231020022003112012031031002000410202000000100000000010050241010000000100001000102010000001331010003001310133010000000010001020011004401010010002001020212202020000000000210100200000011320021020033212213221222223111010000003000110000000010220331021032003101300230322201222332210000000102335122213100300352301000102001103002321422202102200420000000130222102200210231135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALKIGKGDEVITPSLTWVSTLNMISLLGATPVMVDVDRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVGTYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDRQTWGRAPQAEVLTPGYKYNLTDINAAIALTQLVKLEHLNTRRREIAQQYQQALAALPFQPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTTADADHVITALQQLAGQ
1	MUSTER	2fniA	0.280	0.971	3.563	threading_1	M-KEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADEIITTPISFVATANMLLESGYTPVFAGIKN-DGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALSVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKK--------DFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQ-KFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES
2	SPARKS	3nu7a	0.334	0.931	4.490	threading_2	-IEFIDLKNARIKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSVACTSFFPSKPLGCGDGGAIFTNDDELATAIRQIARHGQDR------------RYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVG-IGTPFIEVNNISVYAQYTVRMD------NRESVQASLKAAGVPTAVHYPPLNKQPAVA--DEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN----
3	PROSPECT2	3bn1A	0.352	0.960	5.040	threading_3	L-PRISVAAPRLDGNERDYVLECMDTTWISSGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDATFSFFGNI-ITTGEGGMITTNDDDLAAKMRLLRGQGMDPN----------RRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGRVTKPHVALTGRHVFWMYTVRLGE-GLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHL-ATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL-V
4	PPA-I	2fniA	0.277	0.971	5.682	threading_4	-MKEFAYSEPCLDKEDKKAVLEVLNSKQLTQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADEIITTPISFVATANMLLESGYTPVFAGIKN-DGNIDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFAASVFSFHAIKPITTAEGGAVVTNDSELHEKMKLFRSHGMLKK--------DFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQK-FFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFES
5	HHPRED-l	1mdo_A	0.825	0.937	2.565	threading_5	--DFLPFSRPA-GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAG-HIAL-ALGIGEGDEVITPS-TWVSTLN-IVLLGANPV-VDVDRDTL-VTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVD-----------QAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQA-ADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDAL-ASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPD-TESDFDRVITALHQIAG-
6	HHPRED-g	1mdo_A	0.825	0.937	3.405	threading_6	--DFLPFSRPA-GAEELAAVKTVLDSGWITTGPKNQELEAAFCRLTGNQYAVAVSSATAG-HIAL-ALGIGEGDEVITPS-TWVSTLN-IVLLGANPV-VDVDRDTL-VTPEHIEAAITPQTKAIIPVHYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVD-----------QAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQA-ADLPFQPLSLPSWEHIHAWHLFIIRVDEARCGITRDAL-ASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPD-TESDFDRVITALHQIAG-
7	SP3	3nu7a	0.334	0.931	4.766	threading_7	-IEFIDLKNARIKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAETVALLGAKPVYVDIDPRTYNLDPQLLEAAITPRTKAIIPVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSVACTSFFPSKPLGCGDGGAIFTNDDELATAIRQIARHGQDR------------RYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLKQVG-IGTPFIEVNNISVYAQYTVRMD------NRESVQASLKAAGVPTAVHYPPLNKQPAVA--DEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTN----
8	SAM-T99	3dr4C	0.346	0.960	4.725	threading_8	-LPRISVAAPRLDGNERDYVLECMDTTWISVGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDP----------NRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGNVTKPHVALTGRHVFWMYTVRLG-EGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATD-DLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL--
9	MUSTER	3dr4C	0.348	0.963	3.535	threading_9	L-PRISVAAPRLDGNERDYVLECMDTTWISSGRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTKAIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPN----------RRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARLGRVTKPHVALTGRHVFWMYTVRLG-EGLSTTRDQVIKDLDALGIESRPVFHPMHIMPPYAH-LATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVLV-
10	SPARKS	3uwca	0.303	0.931	4.128	threading_10	RVPYSYLERQFADEPYLNDLREFIKTADFTLGAELEKFEKRFAALHNAPHAIGVGTGTDAL--ASFKLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSEN-GYVIDPEKIEAAITDKTK-AIPVHYTGNIAD-PALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQACFSLHPLKNLNVSDAGVIITHSDEYAEKLRLYRNHGLIN------------RDVCVEYGINCR--DTIQAVIANRLNQLETITEKRRGIAHLYDQSFVDLSFIDVPVRREGVYHVFHIYVLRVK------YRDQLFQYLKDNGIEVKIHYPIAHLQPAAKSLYQQGDFP-AEKHGEAVITLPAHPYLTEEEINYIIKKVREFYLE

Predicted Tertiary Structure


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TM-score=0.968 to 2fniA SCOP code=c.67.1.4	TM-score=0.972 to 2fniA SCOP code=c.67.1.4	TM-score=0.911 to 1mdoA SCOP code=c.67.1.4	TM-score=0.933 to 2fniA SCOP code=c.67.1.4	TM-score=0.970 to 2fniA SCOP code=c.67.1.4