Template-based Modeling Results for ARCA_ECOLI

Submitted Primary Sequence

>Length 238
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
CCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCEEEECCCEEEEECCCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
5541200002122201200210043211100102102201200242210000000201232002002101531400000000333310100001000101002101020000001200121232222233443220020210100132110012322302003210200100031223211111001201123032321001000210152044134201000001110010213247
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED
1	MUSTER	2oqrA	0.305	0.950	3.653	threading_1	--ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD----DDSEMSDGVLESGPVRMDVERHVVS-VNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE-----
2	SPARKS	1ys6a	0.308	0.941	3.928	threading_2	--SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG-----STATSSSETITVGPLEVDIPGR-RARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG-GPRLLHTVRGVGFVLRMQ---
3	PROSPECT2	1ys6A	0.308	0.941	4.326	threading_3	--SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG-----STATSSSETITVGPLEVDIPGRRARV-NGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLE-AGGGPRLLHTVRGVGFVLR---MQ
4	PPA-I	2oqrA	0.301	0.950	4.265	threading_4	--ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSDGV----LESGPVRMDVERHVVS-VNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE-----
5	HHPRED-l	2gwr_A	0.341	0.912	3.117	threading_5	-DTQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDD--------EPAE-LSIADVEIDVPAHK-VTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP---
6	HHPRED-g	2gwr_A	0.336	0.912	2.562	threading_6	T-RQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDD--------EPAE-LSIADVEIDVPAHKV-TRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP---
7	SP3	1ys6a	0.304	0.941	3.716	threading_7	--SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGS-----TATSSSETITVGPLEVDIPGR-RARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGG-GPRLLHTVRGVGFVLRMQ---
8	SAM-T99	2oqrA	0.307	0.945	3.641	threading_8	--ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGD----DDSEMSDGVLESGPVRMDVERHVVS-VNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL------
9	MUSTER	1ys6B	0.305	0.950	3.386	threading_9	--SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSE-----TITVGPLEVDIPGRRAR-VNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEA-GGGPRLLHTVRGVGFVLRMQ---
10	SPARKS	2gwra	0.326	0.916	3.593	threading_10	DTRQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLD-LLPG-NGIDVCRVLRADSGVPIVL-TAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRN---------DDEPAELSIADVEIDVPAH-KVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--ADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.595 to 1ys6B TM-score=0.642 to native SCOP code=a.4.6.1	TM-score=0.591 to 1ys6B TM-score=0.635 to native SCOP code=a.4.6.1	TM-score=0.929 to 1ys6B TM-score=0.885 to native SCOP code=a.4.6.1	TM-score=0.929 to 1ys6B TM-score=0.884 to native SCOP code=a.4.6.1	TM-score=0.602 to 1ys6B TM-score=0.638 to native SCOP code=a.4.6.1

Experimental Structure

Download 1xheA

SCOP code=c.23.1.1