Template-based Modeling Results for ARAH_ECOLI

Submitted Primary Sequence

>Length 328
MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV
5432322222224222100200210000000000000000002200002101000110010000000000000002010000000000000000012122110000000000000001000000020301100000000000100010002120012123101000112122110100100000000001123121010000001113002102030220100000000000000000000201112121110100000000000000131010200000000000000200010020111011001000000000012133324444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVPNFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTESLWIGVAAGLLLGVLCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIEDESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPVVRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGKISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV
1	MUSTER	3k3fA	0.131	0.881	0.810	threading_1	--GRAFGEQLLKNPLIECDSVCRGCGQVMTVTGLLFFAGIF--NSTTLGVCAVLGTAASTLTAQLLGVDKPLVRAGL----GFNGTLAGIALPFFFNYEPAMLGYVALNGAFTTIIMASLLNFLGKWGVPPFVLATWLLMFGVYLSLFHPGALIAPALPS---------MGTVTGRTFMEGLFKGVGEVMF------------QDNIVTGVI-AILVNS---RISALFAVIGSLVGLCTALIMHSPETPLGLYGFNSVLCGIAMGGIFFYLNI-ALGCMVLGAIATGAFSVLLSPIGMPATWPFIVVTWLFLFAG-----MFRNIAQV
2	SPARKS	2xwub	0.105	0.899	1.032	threading_2	AQFPSDEGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLS---NLYDKLGRLLTSYSWQHTEALLYGFQSIAETIDVN--YSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLA-------DHPVMINSV-----LPLVLHALGNPELSVSSVSTLKKICRKYDLPPYAANIVAVSQDVLM-----KQIH--------KTSQCMWLMQLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSLAIVHILGLLSNLFT---TLDISHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLC
3	PROSPECT2	1ejlI	0.095	0.960	1.520	threading_3	GTVNWS-----------VEDIVKGINQLQATQAARKLLSREKQPPILIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLV--GVLSKADFKTQKEAAWAITNYTQIVYLVHCGIIEPLTKIIQVILDAISNIFQAAEKLGETEK
4	PPA-I	2nq2A	0.123	0.869	1.148	threading_4	--------------------YPKILFGLTLLLVITAVISLGIGRYIDPVQQQVIFQVRLPRILTALCVGAGLALSGVNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKSLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSIL-LSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISG-------SIGWVGLIIPHLSRMLVGASLL------PCTMLVGATYMLLVDNVARSLSIPISILTALIGAPLFGVLVYKL---------
5	HHPRED-l	2nq2_A	0.123	0.841	1.348	threading_5	--------------Y------PKILFGLTLLLVITAVISLGIGQI----DVQQVIQVRLPRILTAVGAGLALIFRNIGVTSGSAFGG--TL-AIFF--GFSLYGLFTSTILFGFGTLALVFLFSFK---SLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSIL-LSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQ----VAISGSI---GWVGLIIPHLSRMLVGAN-H--QSLLPCTMLVGATYMLLVDNVARDAEIPISILTALIGAPLFGVLVY-----KL----
6	HHPRED-g	2nq2_A	0.133	0.802	1.058	threading_6	---------------YPKI-----LFGLTLLLVITAVISLGIRYSLSVPQI-QVIFQVRLPRILT------------ALCVGAGLALSGVVLQGIFRNPLPHIIGVTSGSAFGGTLAIFFGF--SL-YGLFTSTILFGFLFSFK--------SLLMISEPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSI-LLSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAI-------SGSIGWVGLIIPHLSRMLVGA-NHQ--SLLPCTMLVGATYM-LLVDNVADAEIPISILTALIGAPLFGVLVYK----L-----
7	SP3	2nq2a	0.127	0.863	0.800	threading_7	-----------------------YPKILFGLTLLLVITAVISLGILSVPVQQQVIRLPRILTALCVGAGLALSGVGINPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFKSLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSIL-LSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAIS-------GSIGWVGL-IIPHLSRMLVGANHQ--SLLPCTMLVGATYMLLVDNVARSLSISILTALI--GAPLFGVLVY---------KL
8	SAM-T99	2yueA	0.157	0.506	0.644	threading_8	-------------------------------------GSSGSSGPLQFHSVHGDNIRISRDGTLAR----------------RFESFCRAITFSARPVRINERICVKFAEISNNWNG--------------------------GIRFGFTSNDPVTLEGPKYACPDLTNRPGFWAKALHEQYCEKDNILYYYVNGAGDVIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIE--------------------------------------------------------------------------------FLDSRIYMYQ---
9	MUSTER	2nq2A	0.149	0.817	0.771	threading_9	--------------------YPKILFGLTLLLVITAVISLIGRYSLSVPQI-----PVQQQVIFQVRLPRILTA----LCVGAGLALSGVVLQGIFRNPNPHIIGVTSGSAFGGTLAIFFGFSLYGLFTSTILFGFGTLALVFLFSFLLM----ISDTEEKLPSIVFGSFATSNWEKLLFFFVPFLLCSSI---SLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAIS--------SIGWVGLIIPHLSRMLVGASLL------PCTMLVGATYMLLVDNVARSLSIPISILTALIGAPLFGVLVY----------L
10	SPARKS	1ee4a	0.087	0.875	1.022	threading_10	IASGTSAQTKVVVDADLFIQLLYTGSVEVKEQAIWALGNVAGDSVLQMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSTLVQTPALRAVGN---IVTGNDLQTQVVINAG---------------VLPALRLLLSS--------PKKEACWTISTAGNTEQIQAVIDANLIPPLVKLLEV-----AEDKT-KKEACWAISNASSGGLQ----RPDIIRYLVSQ---GCIKPLCDLLEIAD--NRIIEVTLDALENILKMGEADKEARG

Predicted Tertiary Structure


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TM-score=0.541 to 2nuuD SCOP code=f.44.1.1	TM-score=0.760 to 1t5jA SCOP code=a.209.1.1	TM-score=0.617 to 1qgkA SCOP code=a.118.1.1	TM-score=0.762 to 1ialA SCOP code=a.118.1.1	TM-score=0.776 to 1l7vA SCOP code=f.22.1.1