Template-based Modeling Results for ARAG_ECOLI

Submitted Primary Sequence

>Length 504
MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA
CCCCCCEEEEECCEEECCCCEEECCCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCEEEEEECCEEEEECCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCHHHHHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCEEEEEECCEEEEEECHHCCCHHHHHHHHHCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA
554321001021001101102002300020120100000011110100001000001131301000211202132121024010000001011022020000000022123101012310021003004302030213231320110111002002001220200001111110223102200300220353210000000203100200110000111200211231430213100101001301211133333311200201102233222200010110100000001100000001000001322202010330202142011003100000122232210111100210000000331032111032121221022103102030222322122122111110000100132120000110021011101110020011004321000000020220020010000012010001023420322101000132213225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGAGKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKDGRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPISLAVRSGEIVGLFGLVGAGRSELMKGMFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMMLCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADHHIRSLNIKTPGAEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGVAVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA
1	MUSTER	3ozxA	0.204	0.905	1.746	threading_1	--------E-GEVIHRY-KVNGFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDP--NSK----VGKDEVLKRGIYNYFKELNELKIVHKIQYVEYASKFLKGTILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIY-GESSVYGRVSKSYAARVGINNFLGPAENMKIRPDEIKFMKTKMKWTKIIGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQIL-------------SYKPQRIFPN---YDGTVQQYLENAS------KDALSTS---SWFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFK-GEPAGLATS-PVTLKTGMNEFL-RELE-VT
2	SPARKS	1yqta	0.231	0.903	5.585	threading_2	---------EEDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNGDNDSWDGVIRAFRGKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIRETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS----------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIFRRDPDTGR
3	PROSPECT2	1yqtA	0.224	0.903	4.172	threading_3	EE---------DCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLLKDENVRFRPYEIKIERETLVTYPRLVGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDL--------------TVAYKPQYIK---ADYEGTVYELLSKIDASKLNS----------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIGIREQKEIA
4	PPA-I	3ozxA	0.183	0.909	4.152	threading_4	---------EGEVIHRY-KVNGFKLFGLPTKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKKRFRGFKELYSNELKIVHKIQYVEYASKFL-------KGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGENMKIRPDEIKFMLKLKTKMKWTKLGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKP----------------QRIFPNYDGTVQQYLENASKDALSTS---------SWFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFKGEPEKAGLATSPVTLKTGMNEFL--RELEVT
5	HHPRED-l	1yqt_A	0.230	0.887	2.385	threading_5	--------E-EDCVHRYGVNAVLYRLP-VVKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLDNDSWDGVIRRGNELEKLKNGEIRPVVKPVDLIPKAVKGKVIELLKK---------ADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLRGYLKDENRPERVEIERETLVTYPRLVKDFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDAS----------KLNSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP---REG-NRFLASIGITRAN-
6	HHPRED-g	1yqt_A	0.227	0.875	2.236	threading_6	--------E-EDCVHRY------GVNAFVLKEG-VVGIVGPNGTGKSTAVKILAGQLIPNLDNDSWDGVIRAFRGNLKNGEIRPVVKPQYVDLIPKAVKGKVIELLK---------KADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVGIF-SQPKGTRNGINEFLRGYLKDENRPYEVEIERETLVTYPRLVKSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYK---PQYIKADYEGTVYELLSKIDASK-------L---NSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP---R-EG-NRFLASIGITFRR
7	SP3	1yqta	0.229	0.903	6.011	threading_7	---------EEDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCNDSWDGVIRAFRGKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL---------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNGINEFLRGDENVRFRPYEIKFTRETLVTYPRLVKSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS----------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLASIFRRDPDTGR
8	SAM-T99	1g6hA	0.251	0.482	2.584	threading_8	---TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNVLSDPKVVEIYIG-------
9	MUSTER	3bk7A	0.233	0.911	1.536	threading_9	PFNAISIVNLEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCNVIFRGNELQ-NYFERLKNGEIRPVVKPVDLLPKAVVRELLKKVDEVGK------------FEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYPGVYGIFSKPK---GTRNGINEFLGRPYEIRFTKLSERVRETLVEYPRLVGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT--------------VAYKPQYIK---AEYEGTVYELLSKIDSSKLNS----------NFYKTELLKPLGII-DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKEKTALVVEHDVLMIDYVSDRLIVFE-GRALPPMGMREGMNRFLASVITFRRDPDSG
10	SPARKS	1g6ha	0.263	0.476	3.560	threading_10	---TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEISDPKVVEIYIGE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.582 to 1sgwA SCOP code=c.37.1.12	TM-score=0.574 to 1sgwA SCOP code=c.37.1.12	TM-score=0.561 to 1vplA SCOP code=c.37.1.12	TM-score=0.571 to 1sgwA SCOP code=c.37.1.12	TM-score=0.572 to 1sgwA SCOP code=c.37.1.12