Template-based Modeling Results for AMPG_ECOLI

Submitted Primary Sequence

>Length 491
MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT
CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT
45331132122210000000000100000000000100013240313100000000000001000000021110221132200000000000000000011222210100000000000000001000000002102231200000000000100000000000000131001200010000000000000110233232221231012100110220022320000000000020010001000000003101020210000020000000000000000002101001000000000000000000001123101000000001100000000000000020022212100000000011002100000000003010000000000000000000000032113123333311122101200100010100000100000000002102111120012002000000000000000000111232324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENIDLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLEPGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSGGLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGALYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGTSAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAAVPGLILLLVCRQTLEYTRVNDNFISRTAYPAGYAFAMWTLAAGVSLLAVWLLLLTMDALDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT
1	MUSTER	1pw4A	0.138	0.825	1.379	threading_1	IDPTYRRLR---QIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSDLGFALSGISIAYGFSKFIMGSVSDRSNP------RVFLPAGLILAAAVMLFMGFVPATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMRDTPQSCGLPPIEEYAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFA-LDKSSWAYFLYEYAGIPGTLLCGWMSDKV--NRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFGWDGGFMVMIGGSILAVILLIVVMIGRRHEQLLQELVP--------------------------------------------------------------------------
2	PROSPECT2	1b3ua	0.098	0.980	2.369	threading_2	AAAVLIDELRNEDVQLRLNSIIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHFVPLVKRLAGGDWFTSRTSACGLFSVCYSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFALDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQL----------LPQEDLEALVMPTLRQAAEDKSWRVRYMVALQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCVIMSQILPCIKELVSIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIINEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPISTLQSEVKPILALTVLSLA
3	PROSPECT2	1qgra	0.102	1.000	2.236	threading_3	MEVELSRVLANPVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVASQCVAGIACAEIPVLVANVTNPNSTEHMKESTLEAIGYICAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAQLKPLVIQAMPTLIELMVVVRDTAAWTVGRICELLPLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAARSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLSDVVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMELGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLRVEFILSFIDHKLKNQA
4	PROSPECT2	1w63A	0.091	0.982	2.227	threading_4	MPAAIRSSFREERNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLQDVHLLMTNCIKNDLNHSTQFVQGLALCTLEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPANLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFR---------KLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATGNAILYETVLTIMDIKSESGLRVLAINILGRFLYVALTSLLKTVQTDHNAVQRHRSTIVVSIKRRAMELSFALVNGNNIRGMMKELLYFLPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSAVPNLIQLITNSVEMHAYTVLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSTRFTCTVNRIKKVVSIYVELQQRAVEYNALFKMRSALLERMK
5	SPARKS	1pw4a	0.139	0.833	3.084	threading_5	EIDPTYRRLR-WQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALGISIAYGFSFIMGSVSDRSNP------RVFLPAGLILAAAVMLFMGFVWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYA-GIPGTLLCGWMSDKFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGRRHEQLLQELVP--------------------------------------------------------------------------
6	PPA-I	1pw4A	0.117	0.837	2.001	threading_6	AEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSDLGFALSGISIAYGFSKFIMGSVSDRSNP------RVFLPAGLILAAAVMLFMGFVPWTSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAPQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFGWDGGFMVMIGGSILAVILLIVVMIGRRHEQLLQELVP--------------------------------------------------------------------------
7	HHPRED-l	3o7q_A	0.138	0.780	5.286	threading_7	-------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLISAFYFGYFIPIPAGILMKKL-----SYKAG-IITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRY-AVEEGMTAGFAANYLTG-TMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISA---F-AGGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSF-IVMTIIGGGIVTPVMGFVSDAGNIPTAELIPALCFAVIFIFARFRSQT--------------------------------------------------------------------------------------
8	HHPRED-g	3o7q_A	0.136	0.776	5.003	threading_8	-------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGLISAFYFGYFIPIPAGILMKKL-----SYKAG-IITGLFLYALGAALFAEI---MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNHSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIGMTAGFAANYLTGTMVC-FFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAF----AGGHVGL-IALTLCSAFMSIQYPTIFSLGIKNLGQD-TKYGSSF-IVMTIIGGGIVTPVMGFVSDAGNIPTAELIPALCFAVIFIFARFRSQT--------------------------------------------------------------------------------------
9	SP3	1pw4a	0.134	0.835	2.547	threading_9	PAAEIDPTYRRLRWQIFLGIFFGYAAYYLVNFALAMPYLVEQGFSRGDLGFALGISIAYGFSFIMGSVSDR-----SN-PRVFLPAGLILAAAVMLFMGFVWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMQSCGLPPIEEYKNDTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYA-GIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAAAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGRRHEQLLQELVP--------------------------------------------------------------------------
10	SAM-T99	1pw4A	0.181	0.764	0.823	threading_10	RWQIFLGIFFGYAAYYLVRKNFALAMPYLV----------EQGFSRGDLGFASGISIAYGFKFIMGSVSDRSN-P-----RVFLPAGLILAAAVMLFMGFVPWATSIAVMFVLLFL---------------MVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMA-WFNWHAALYMPAFCAILVAAFAMMRDTPQSGLPPIEEYKNDTAKQIFMQYVLPNKLLAIANVFVYLLRYGILD-WSPTYLK-EVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPANPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRR----------------------------------------------------------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.833 to 1pw4A SCOP code=f.38.1.1	TM-score=0.847 to 1b3uA SCOP code=a.118.1.2	TM-score=0.846 to 1pw4A SCOP code=f.38.1.1	TM-score=0.593 to 1qgkA SCOP code=a.118.1.1	TM-score=0.795 to 1w63C SCOP code=i.23.1.1