Template-based Modeling Results for AMPE_ECOLI

Submitted Primary Sequence

>Length 284
MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV
CHHHHHHHHHHHHHHHCCCHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV
32000000110021013113101011102101222310110210000000000000002002001220021000000000000013003102100210132113001100020111301222032320122013000000010000000001101220110000000011012110323232331210011001001000000000000000203200100020001141212200010012123233222213102000211322100000000000012113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTLGMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRNDSHARATMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGTWGPVTLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKALPAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIALLTIYGALV
1	PROSPECT2	1ee4a	0.088	1.000	1.439	threading_1	QELPQMTATVKFRQILSREHRPPIDVVIQEFMRENQPEMLQLEAAWALTNIAAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIENIKKEACWTISNITAGNTEQIQAVIKLLEVAEDKTKWAISNASSGGLQRPDIIRYLVSKPLCDLLEIADNRIIEVTLDALKIIETYF
2	PPA-I	1oyzA	0.100	0.884	1.303	threading_2	YGLYNQCKKLNDDELFRLLDD-----------HNSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQ-IKICKKCEDNVFNILNNALNDKSACVRATAIESTAQRCKKNPIY-SPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKGDVRNWAAFAININKYDNSDIRDCFVELQDKNEEVRIEAIIGLSYRKD-KRVLSVLCDELKKNTVYDDIIEAAGELGDKTLYKFDDNEIITSAIDKLKRS-------------------
3	PROSPECT2	1ejlI	0.081	1.000	1.408	threading_3	GTIVKGIATQAARKLLSREKQPPIDNIIRSFLGKTDCSPIQFESAWALTNIAAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKDPLLALLAVPCGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIKVIDAGALAVFPSLLTNPKTNIQKEMSNITAGRQDQIQQVVNFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVILDAISNIF
4	PPA-I	3mkrA	0.091	0.894	1.133	threading_4	PERDVERDVFLYRAYLAQRKY--GVVLDEIKPSSAPELQAVRMFAEYLASHSRRDAIVAELDREMSR-------------SVDVTNTTFLLMAASIYFYDQNPDAALRTLHQ---------GDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAG-----GEKLQDAYYIFQEMADKCTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGH-PETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYRAKENDFDRLV
5	PROSPECT2	2bkuB2	0.101	0.940	1.365	threading_5	QELQSNILTVLAAVIRKSPSSVEADMLMGLFF---RLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMQMISNPNARRELKPAVLSVFGDIAFIPYLNDIMALCVAAQNTKPENQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFDWVIDYIKRTRSGQLFSQATKDTARW-------------AREQQKRQLS-L
6	PPA-I	2qtqA	0.080	0.613	1.070	threading_6	-----------------------------------------------------------------------------------------------DNLETPGARDLLLQTASNIREGDV-VDISLSELSLRSG-----LN-----SALVKYYFGNKAGLLKALLDRDENIVKSVDALLAKDDSPEAKLRRHISKCIDTYYDYLNRLLRLVRDSDEAEAKRIADQYLLPLHRAYNRFIGEGVKAGVFRP-INPQLFYFTVTGAA---DRFFSARLVLKHCFDQDT
7	PROSPECT2	2uy1A	0.081	1.000	1.331	threading_7	LDLWMLYIEYTLGQFENYWDSYGLYKEYIEEEGKIEDEQTRIEKIRNGYMRALLSELWKDFENFELELNKITGKKIVGDTLPIFQSSFQRYQQIQPLIRGWSVKNAARLIDLEMENGMKLGGRPHESRMHFIHNYILDSFEEVYFFYSEYLIGIGQKEKAKKVVERGIEFLSLYYGLVMDEEAVYGDLKRKYSFSKELDLLRINHLNYVLKKRGLELFRKLFIELGNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDSTLLKEEFFLFLLRIGDME
8	PPA-I	2q24B	0.091	0.577	1.050	threading_8	-----------------------------------------------------------------------------------------------------NRDKILAAAVRVFSEEGLDAHLERIAREAGVGSGTL---YRNF-----------PIEAAYRNEVARLCDSVPGLLAELPPAEALRAWTRRFIDYATAKLGADALRAVVASGGDPYGDSRQLIQSA-----LTALDAAAAAGEIRSDIRSTDFAALAGIALTSSRPDQRAQAERLLDLVLDGLR
9	PROSPECT2	3a6pA1	0.088	1.000	1.327	threading_9	AQLVKAVTVMFCEEFKEKCPICVLEHVVKFMLIELDTLSKQGETQTELVMFILLRLAEDVVPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRLNTLAGYIDWVSMSHLLEILCLLLNEQELQLGAAECLLIAVSRKGKLEDRKPLMVAMHYILSAAQTADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADRSSTQMTWGALFRHEILSRDPLLLAIIPKGFPSKTDSPSCEDEDFNAFFNSSRAQQGEVMRLACRLDPKTS
10	PPA-I	3b6aA	0.131	0.644	1.002	threading_10	-------------------------------------------------------------------------------------------------MAPLTQDRIVVTALGILDAEGL-DALSMRRLAQELHASLYAHNRDELLDLVFDIVLEPEPGRWAEQVKEMCRSLRRMFLAHRPLGPNGMVGMERTMNLLRSGDELAAYGGDLLS---TFVTAEALEQSSRQGREQAGVFADQLHGYLKSLPATSFPNLVHLAGPITSLDSDRRFELGLEIIIAGLLA

Predicted Tertiary Structure


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TM-score=0.728 to 1t5jA SCOP code=a.209.1.1	TM-score=0.691 to 1wa5B SCOP code=a.118.1.1	TM-score=0.875 to 1oyzA SCOP code=a.118.1.16	TM-score=0.743 to 1ialA SCOP code=a.118.1.1	TM-score=0.596 to 1hz4A SCOP code=a.118.8.2