Template-based Modeling Results for ALX_ECOLI

Submitted Primary Sequence

>Length 321
MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEECHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG
544211111100000000000000001203322321213200000000000011010000001222314211221011000000011000000000000002103022211420110000000001000000001001001000100000000000100123333222223100200212032232232220002221111000000000001001000001101100001120000000000000000000100000021011011000000000001000110120122001000000000000010012133234435
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAWSLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFSYFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMALAHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVIFAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFIGIKMLIVDFYHIPIAVSLGVVFGILVMTFIINAWVNYRHDKQRGG
1	PROSPECT2	3a6pA1	0.114	0.953	1.550	threading_1	AKTQVAIVRHFGLQILEHVVSVMELIANGTLNILEEENHIKDALSRIVVEMIKREW---------PQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTL--TQNMERIFSFLLNTLQENVNKYQQVANCRVGVAALNTLAGYIDWVSAENCKLLEILCLLLNEQELQLGLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQTADG----GGLVEKHYVFLKRLCQVLCALGNQLCALLGAPSNFGKYLESFLAFTTRSSTQMTWGASRDPLLLAIIPKYLRASMSFQMAGEWLKYQLSTF
2	PPA-I	3zuxA	0.120	0.829	1.125	threading_2	FKWAGPYIPWLLGIIMFGMGLTLKPFDILFKHPKVVIIGVIAQFAIMPATAWCL-----------SKLLNLPAEIAVGVILVGCCPGG------TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLALEIQAAGMLMSIVKMVLLPIVLGLIVH------KVLGSKTEKLTDAL----------------------PLVSVAAIVLIIGAVVGAS---KGKIMESGLLIFAVVVLHNGIGYLLGFFAAKWTGLPYDAQKALTIEVGSGLAAALAAAHFAAAPVPGALFSVWHNISGSLLATYWAAKA-------
3	PROSPECT2	1ee4a	0.109	0.941	1.523	threading_3	QENSDDMQEQLSATVKFRQILVVPRLVEFMRENQPEMLQLEAAWALTNIA-------------------SGTSAQTKVVVDADAVPLFIQLLYEQAIWALGNVAGDSTDYRDYVLQCNAMEPILLIRTATWTLSNLCVVSQALPTLAKLTLVDACWAISYLSDGPQEAIQAVIPKRLVELLSHESTVTGNDLQTQVVINAGVLPALRLLIKKEACWTISNITAGNTEQIIDANLIPPLVKLLEVDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKENADFIEKAG
4	PROSPECT2	1ejlI	0.085	0.953	1.510	threading_4	TVNWSVEDIVKGIESQLQATQAARKLLSREKQPPIDNIIRPIQFESAWALTNIASG---------------TSEQTKAVVDGGAIPAFISLAHISAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLAVEQILPTLVRLLHHNDPELADSCWAISYLTDGPNERKKGVVLLGATELPIVTPALRAIGNIEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNQDQIQQVVNLVPFLVGVKEAAWAITNYTIIEPLMNLLSAKDTKIIQVILDAISNIFQAAETEKLSIMIEECGG
5	PROSPECT2	2bkuB2	0.113	0.879	1.463	threading_5	TDTVAE------TSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNIL---------------------TVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFY---AISALAASLGKGFEKYLETFSPYLLKALNITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELK--------PAVLSVFGDIASNIGADFIPYLNDIMALCPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFI-AQVAEDPQLYSEDATSRAAVGLIGDIAWVIDYIKRTRSKRQLSL
6	PROSPECT2	1jdha	0.115	0.950	1.443	threading_6	MQNTNDVETARCTAGTLHNLSGIPALVKMLGSPVDSVLFYAITTITTDCLQILAYG---------------NQESKLIILASGGPQALVNIKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITE-PAICALRHLTSRHQEAEMAQNAVRLHYKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGFRMS
7	MUSTER	3a0oA	0.129	0.966	0.887	threading_7	AKDPNHCGWAEFYEKSVEPWLERPVMPEYPNNTRVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATLYSP---------WAGTDGGWAEGPHYWMTGMAYLIEAANLIRSYI--YDLYQRPFFQNTGRFPLYTKARRANFGDDSTLGDLPGLGYNVRQFAGVTGNGHYQWYFDHIKADATAFYNYGWWDLNFDDLVYRHDYPQVEAVS
8	SPARKS	3m1ic	0.077	0.931	0.854	threading_8	YRYIETNILELLSTKFMTRAITLKCLTEVSNLKIPQDIKRQTVLFFQNTLQQIATS-----VMPVTADLKATYANANGNDQSFLQDLAMFLTTYLARN--RALLESDESLRELLLNAHQYLIQLS------------KIEERELFKTTLDYWHNLVADLFYEPLKKHIYEEICSQLRLVIIENMVRPEEVLVVENDEGEIVSDTIQLYKSEREVLVYLTHLNVIDTEEIMISKLARQIDGSEWSWHNINTLSWAIGSISGTMS---EDTEKRFVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVYPRFLKAHWNFLRTVI
9	PROSPECT2	1xm9A	0.097	0.935	1.414	threading_9	GLTIQDEKYQAIGAYYIQHTCGICKLVDLLRSPN-----QNVQQAAAGALRNLVFR---------------STTNKLETRRQNGIREAVSLKQLTGLLWNLSSTDELKEELIADALPVLADRVIIPFSVFFNATGCLRNLDAGRQTMLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSALPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIQIARLSDVVRSGASLLSNMSRHPLLHRVMGNQ-VFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYF
10	PPA-I	3g61A1	0.106	0.794	0.999	threading_10	------------------------------------------------------------------VSRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKK

Predicted Tertiary Structure


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TM-score=0.421 to 2q7nB SCOP code=a.26.1.1	TM-score=0.628 to 1u6gC SCOP code=a.118.1.2	TM-score=0.431 to 1pv6A SCOP code=f.38.1.2	TM-score=0.709 to 1ialA SCOP code=a.118.1.1	TM-score=0.750 to 1ialA SCOP code=a.118.1.1