Template-based Modeling Results for ALSC_ECOLI

Submitted Primary Sequence

>Length 326
MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK
52333424232234432201100210000000000000000011320100210010011001000000000000001100000000000000000100211111110000000000000000000001202011000000000001000100021100211122011111121121211000000001011011230310100000010220021120303110000000000000000000002001121210101000000000000001110302000000000000002000100302110110000000000000132234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MGFTTRVKSEASEKKPFNFALFWDKYGTFFILAIIVAIFGSLSPEYFLTTNNITQIFVQSSVTVLIGMGEFFAILVAGIDLSVGAILALSGMVTAKLMLAGVDPFLAAMIGGVLVGGALGAINGCLVNWTGLHPFIITLGTNAIFRGITLVISDANSVYGFSFDFVNFFAASVIGIPVPVIFSLIVALILWFLTTRMRLGRNIYALGGNKNSAFYSGIDVKFHILVVFIISGVCAGLAGVVSTARLGAAEPLAGMGFETYAIASAIIGGTSFFGGKGRIFSVVIGGLIIGTINNGLNILQVQTYYQLVVMGGLIIAAVALDRLISK
1	SPARKS	2xwub	0.077	0.911	1.042	threading_1	VLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSYDKLGRLLTSYSWQHTEALLYGFQSIAETID---VNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLHPVMINSV-LPLVLHPELSVSSVSTLKKICRECKYLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSAL----------QVEEILKN----------LHSLISPYIQQLEKLAEEI--PNPSNKLAIVHILGLLSNLFT---TLDISHPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPM
2	PROSPECT2	1ejlI	0.067	0.957	1.541	threading_2	GTVNWS------------VEDIVKGLESQLQATQAARKLLSREKQPPILIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGSAFRDLVIKHGAIDPLLALGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTKEATWTMSNITAGRQDQIQQVVNHGLVPFLV--GVLSKADFKTQKEAAWAITNYTQIVYLVHCGIIEPLTKIIQVILDAISNIFQAAEKL
3	PPA-I	2nq2A	0.147	0.856	1.164	threading_3	---------------------YPKILFGLTLLLVITAVISLGIGRYSLSVPQID----PVQQQVIFQVRLPRILTA----LCVGAGLALSGVVLQGIFRNPGFSLYGLFTSTILFGFGTLALVFLFSFKSLLMLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSIL-LSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQVAISG-------SIGWVGLIIPHLSRMLVGASLL------PCTMLVGATYMLLVDNVARSLSIPISILTALIGAPLFGVLVYKL----
4	HHPRED-l	2nq2_A	0.128	0.840	1.116	threading_4	------------------YPKI---LFGLTLLLVIT-AVISLGIPQI----DQQQVIFQRLPRILTCVGAGLALIFRNIGVTSGS--AFGGTLA-IFF-G--FSLYGLFTSTILFGFGTLALVFLFSFK---SLILIGMILSGLFSALVSLLQYISDTEEKLPSIVFWLMGSFATSNWEKLLFFFVPFLLCSSIL-LSLSWRLNLLSLDEKEAKALGVKMAPLRWLVIFLSGSLVACQ----VAISG---SIGWVGLIIPHLSRMLVGA----NHQSLLCTMLVGATYMLL-VDNVARAEIPISILTALIGAPLFGVLVYKL----
5	SPARKS	1a4ya	0.130	0.871	1.002	threading_5	LLQQCQVDCGLTEARCKDISSALRVNPALLGDVGVHCVLQGLQTPSCIQKLSLQNCLTGAGCGVLSSTLRTLPTLQ-ELHLS---DNLLGDAGLQLLCEGLLDPQCLQLEYCSLSAASCEPLASVLRAKPDFKEL--TVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN--------CRDLCGIVASKASL-RELA-LGSNVGMAELCGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLK---ELS------LAGNEL-------GDEGARLLCETLLEPGLWVCSFTAAC----------CSHFSSVLAQN
6	PROSPECT2	3a0oA3	0.080	0.920	1.475	threading_6	GRSARHAAAQTSHPRLWLNSEQLSAFADAVWAEFYEKSVEPWLERPVMVATLWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWDTKGATSRAYNDEAGFR---VVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVA----------DHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQ----------GESDEAGEWTLYSPWAGTGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNRFPLYTKAPGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQ---WYFDHIKADALNFDDLVYRHDYPQ
7	HHPRED-l	2qi9_A	0.146	0.862	1.115	threading_7	---LT-LARQQ---QRQNIRW-L----LSLSVL-LLALLLSLSAGDWFTPRG-ELFVWQRLPRTLALVGAALAILFENAELGVSNGAGVGLIAAV-LLGQGQLPNWALGLSAIAGALIITLILLRFARR-HLSTLLAGVALGIISSAL-TWAIYFSTS-VDLRQL-YW--GGFGGVDWRQSWL-LIPVLLWISS----QSRP---LALGEISARQLGLPLWFWRNVLVAATGW-VGVSV----ALAG---AIGFIGLVIPHILRLSGLT----DHRVLLGCALAGASALLLADIVAAAAELPIGVVTATLGAPVFIWLLLK--A--
8	PROSPECT2	1ee4a	0.097	0.948	1.461	threading_8	QE----------------LPQMTQQLNMQEQLSATVKFRQILSREHRPPIDVVIQVVPRLVEEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLLIRTATWTLSNLCRGKKPQPDWSVVSQALPTAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIIKKEACWTISNITAGNTEQIAEDKTKKEACWAISNSSGGLQRPDIIRYLVSQGCIKPLCDLLE-IADNRIIEVTLDALENILKMGEADKEAR
9	PROSPECT2	2fozA	0.110	0.868	1.444	threading_9	MA------------------SLSRFRGCLAGALLGDCVGSFYEAHDTVDLTSVLRHVQYYTDDTAMARALVQSLLKEAFDEVDMAHRFAVVTVFKKLLNPKCRDVFEPARAGAMRVAGISLAFARLSAQLTHASSLGYNGAILQALAVHLALQGESSSEHFLKQLLGHMEDLEGDAQSVLDAYSSRLKKIGELLDQASVTR--------EEVVSELGNGI-------AAFESVPTAIYCFLRCMEPDPEIPSAFNSLQRTLIYSISLGGDT----------DTIATMAGAIAGAYYGMDQVPESWQQSCEGTDILAQSLHRVFQKS
10	PROSPECT2	1jdha	0.107	0.975	1.415	threading_10	AVVNLILNDEDQVKKEASRHAIMRSPQMVSAIVCTAGTLHNLSHH----REGLLAIFKSVLFYAITTLHNLLLLNKTNVKFLAITTDCLQILALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLVQNCLWTLRNLSDAATKQEGMEGLLGTLV--QLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLAEMAQNAVRLHYGLLHPPSHWPLIKATVGLI--RNLALCEQGAIPRLVQLLIVEGCTGALHILARDVHNRIVIRGIQRVAAGVLCELAQD

Predicted Tertiary Structure


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TM-score=0.760 to 1t5jA SCOP code=a.209.1.1	TM-score=0.629 to 1qgkA SCOP code=a.118.1.1	TM-score=0.703 to 1ialA SCOP code=a.118.1.1	TM-score=0.740 to 1l7vA SCOP code=f.22.1.1	TM-score=0.718 to 1l7vA SCOP code=f.22.1.1