Template-based Modeling Results for ALSA_ECOLI

Submitted Primary Sequence

>Length 510
MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRDDMSEEEIMAWALPQE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRDDMSEEEIMAWALPQE
CCCCEEEEECCEEECCCCEEECCCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEEECCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCEECHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCEEEEEECCCEEEEEEHHCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRDDMSEEEIMAWALPQE
553200112100110110200220102012010000001111010000100000123140100021020222213101511000000101103202000000002212331111000013201210130033020302132312201101210020021011202000011111112331022002002203532100000002011023001100001111000102122011210011100130322012233322322311001022022433220220002012010000000011000000000000233220201021220214101100420000002223321011210001000002023212231220103322123002200320213022222212212211111010010011111000011002101110101002002100522100000002022003101000000202001102433312221011012344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MATPYISMAGIGKSFGPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNISYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVSNDDIVRLMVGRELQNRFNAMKENVSNLAHETVFEVRNVTSRDRKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLTQILTNRDDMSEEEIMAWALPQE
1	MUSTER	3ozxA	0.201	0.898	1.795	threading_1	------E-GEVIHRY-KVNGFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDP-----NSKVGKDEVLKRFGIYNYFKELNELKIVHKIQYV---YASKFLKGTVNILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNF----LKGYLPAENMKIRPDEIKTKMKWTKIIKKGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQIL-------------SYKPQRIFPN---YDGTVQQY--LENASKDALSTSS----------WFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFK-GEPEKAGLATSPVTLKTGMNEFL-RE
2	SPARKS	1yqta	0.184	0.894	5.857	threading_2	-------EEDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNGDNDSWDGVIRAFRGYFEKLKNGPVVKPQYVDLIPKAVKGKVIEL-------------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDENVRFRPYEIKEIERETLVTYPRLVDYGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS-------------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLIGITFRRD
3	PROSPECT2	1yqtA	0.189	0.892	4.225	threading_3	E-------EDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVNYFEKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL-------------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSQPKGTRNFLRGYLKDENVRFRPYEIKFTKEIERETLVTYPRLVKDGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDL--------------TVAYKPQYIK---ADYEGTVYELLSKIDASKLNS-------------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALP-PGREGNRFLASIGITA
4	PPA-I	3ozxA	0.189	0.902	4.337	threading_4	-------EGEVIHRY-KVNGFKLFGLPPKNNTILGVLGKNGVGKTTVLKILAGEIIPNFGDPNSKVGKKRFRGFKELYSNELKIVHKIQYVEYAS-----------KFLKGTVNEILTKIDERGKKDEVKELLNMTNLWNKDANILSGGGLQRLLVAASLLREADVYIFDQPSSYLDVRERMNMAKAIRELL-KNKYVIVVDHDLIVLDYLTDLIHIIYGESSVYGRVSKSYAARVGINNFLKGPAENMKIRPDEIKFMLKLKTKMKWTKIIKKGDFQLVVDNGEAKEGEIIGILGPNGIGKTTFARILVGEITADEGSVTPEKQILSYKP----------------QRIFPNYDGTVQQYLENAS----KDALSTSS--------WFFEEVTKRLNL-HRLLESNVNDLSGGELQKLYIAATLAKEADLYVLDQPSSYLDVEERYIVAKAIKRVTREKAVTFIIDHDLSIHDYIADRIIVFK-GEPEKAGLATSPVTLKTGMNEFLREL
5	HHPRED-l	1yqt_A	0.199	0.876	2.371	threading_5	------E-EDCVHRYGVNAVLYRLP-VVKEG-VVGIVGPNGTGKSTAVKILAGQLIPNGDNDSWDGVIRRGNELEKLKNGEIRPVVKPQDLIPKAVKGKVIELL-------------KKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIFSPKGTRNGINEFLRGYNVRFRPFTKTGERVEIERETLVTYPRLVKDYGFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYI---KADYEGTVYELLSKIDA-------------SKLNSNFYKTELLKPLGI-IDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRALPP----REGRFLAS-IGI-
6	HHPRED-g	1yqt_A	0.199	0.867	2.195	threading_6	-----------EED--CVHRYGVNAFVLYEG-VVGIVGPNGTGKSTAVKILAGQLIPNLDNDSWDGVIRAFRGNQENGEIRPVVKPQYVDLIPKAVKGKVIELLK-------------KADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGYLKDENFRPYEIERVEIERETLVTYPRLVKDGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYI---KADYEGTVYELLSKIDASK----------LN---SNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHL-EKEKTALVVEHDVL-IDYVSDRL-VFEPGKYGRAL-PP----REG-NRFLASIG
7	SP3	1yqta	0.184	0.894	6.108	threading_7	------E-EDCVHRY-GVNAFVLYRLPVVKEGVVGIVGPNGTGKSTAVKILAGQLIPNLCNDSWDGVIRAFRGKLKNGEIRPVVKPQYVDLIPKAVKGKVIEL-------------LKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPVYGIFSQPKGTRNGINEFLRGDENVRFRPYEIKFTVEIERETLVTYPRLVDYGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVK-LAGVEEPTEGKIEWDLT--------------VAYKPQYIK---ADYEGTVYELLSKIDASKLNS-------------NFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLEKNEKTALVVEHDV-LIDYVSDRLVFEGEPGKYGRALPPGREGNRFLIGITFRRD
8	SAM-T99	1g6hA	0.263	0.484	2.578	threading_8	-TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGEFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKNVLSDPKVVEIYIG--
9	MUSTER	3bk7A	0.210	0.906	1.570	threading_9	FNASIVNLEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVELQNYFERLKNGIRPVVKPVDLLPKAKVRELLKK----VDEVGK------------FEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKPKGTRNGINEFLGKDENVRFRPYEIRFTKLSRETLVEYPRLVDYGSFKLEVEPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLT--------------VAYKPQYIK---AEYEGTVYELLSKIDSSKLNS-------------NFYKTELLKPLGII-DLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKEKTALVVEHDVLMIDYVSDRLIVFE-GEPGRHGRALPPMGMREGMNRFLASV
10	SPARKS	1g6ha	0.276	0.476	3.678	threading_10	-TMEILRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEICPGEFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEESDPKVVEIYIGE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.576 to 1sgwA SCOP code=c.37.1.12	TM-score=0.579 to 1sgwA SCOP code=c.37.1.12	TM-score=0.574 to 1sgwA SCOP code=c.37.1.12	TM-score=0.573 to 1sgwA SCOP code=c.37.1.12	TM-score=0.585 to 1sgwA SCOP code=c.37.1.12