Template-based Modeling Results for ALR1_ECOLI

Submitted Primary Sequence

>Length 359
MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
CCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCCEEEEEEHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCCCCCCCEECCCEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCEECCCCCEECCCCEEEEEEEEECCCCCCHHCCCCCEEEECCEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHCCCCCCCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
53311010013002200220241033110000010101000001002002402000001021012023021321000010102131011003220100001231010013122421010001001111100021310320021024033021010000000102133121022002102100322221100000000011220100000000000001123332221312011001010100001204322100110112033211000000000110121022111000211201000100000000001212314211100000320203200410410110000302231211226
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
1	MUSTER	3b8tA	0.986	0.997	3.798	threading_1	MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPV-TVWMLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSALEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
2	SPARKS	1rcqa	0.463	0.986	6.201	threading_2	MRPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWL-MDSGMHRVGFFPEDFRAAHERLRASGKV-AKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERA-HPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL-KRVPRVYSG
3	PROSPECT2	2rjgA	0.989	0.997	6.391	threading_3	MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPV-TVWMLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSPLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
4	PPA-I	3b8tA	0.986	0.997	5.156	threading_4	MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLETARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNEEQLAALEEASLDEPV-TVWMLDTGMHRLGVRPEQAEAFYHRLTQCKNVRQPVNIVSHFARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVSALEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGDGYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERIAEMTKVSAYELITRLTSRVAMKYVD
5	HHPRED-l	1rcq_A	0.465	0.983	4.044	threading_5	MRPARALIDLQALRHNYRLAREAT-GARALAVIKADAYGHGAVRCAEALAEADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWL-MDSGMHRVGFFPEDFRAAHERLRASGKV-AKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAH-PLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNLK-RVPRVYS-
6	HHPRED-g	1rcq_A	0.466	0.986	3.480	threading_6	MRPARALIDLQALRHNYRLAREAT-GARALAVIKADAYGHGAVRCAEALAAADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWL-MDSGMHRVGFFPEDFRAAHERLRASGKVAKIV-MMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFER-AHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL-KRVPRVYSG
7	SP3	1rcqa	0.463	0.986	6.060	threading_7	MRPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWL-MDSGMHRVGFFPEDFRAAHERLRASGKV-AKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERAH-PLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNLK-RVPRVYSG
8	SAM-T99	1rcqA	0.460	0.986	3.900	threading_8	MRPARALIDLQALRHNYRLAREAT-GARALAVIKADAYGHGAVRCAEALAEADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWL-MDSGMHRVGFFPEDFRAAHERLRASGK-VAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFERA-HPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNL-KRVPRVYSG
9	MUSTER	1rcqA	0.463	0.986	3.583	threading_9	MRPARALIDLQALRHNYRLAREATG-ARALAVIKADAYGHGAVRCAEALAAADGFAVACIEEGLELREAGIRQPILLLEGFFEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWLM-DSGMHRVGFFPEDFRAAHERLRASGKV-AKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDWVRPGILLYGATPFER-AHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAADGTLVFIDGKPGRLVGRVSMDMLTVDLTDHPQAGLGSRVELWGPNVPVGALAAQFGSIPYQLLCNLK-RVPRVYSG
10	SPARKS	1bd0a	0.314	0.986	6.008	threading_10	HRDTWAEVDLDAIYDNVENLRRLLPDTHIMAVVKANAYGHGDVQVARTALGASRLAVAFLDEALALREKGIEAPILVL-GASRPADAALAAQQRIALTVFRSDWLEEASAYSGPFPIHFHLKMDTGMGRLGVKEEETKRIVALIERHPHF-VLEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSPGIKPLLPYPLKEAFSLHSRLVHVKKLQPGEKVSYGATYTAQTEEWIGTIPIGYADGWLRRLQ-HFHVLVDGQKAPIVGRICMDQCMIRLPG--PLPVGTKVTLIGRQISIDDVARHLETINYEVPCTISYRVPRIFFR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.950 to 1rcqA TM-score=0.999 to native SCOP code=b.49.2.2	TM-score=0.950 to 1rcqA TM-score=0.999 to native SCOP code=b.49.2.2	TM-score=0.988 to 1rcqA TM-score=0.957 to native SCOP code=b.49.2.2	TM-score=0.952 to 1rcqA TM-score=0.999 to native SCOP code=b.49.2.2	TM-score=0.950 to 1rcqA TM-score=0.999 to native SCOP code=b.49.2.2

Experimental Structure

Download 2rjgA

SCOP code=b.49.2.2