Template-based Modeling Results for ALLS_ECOLI

Submitted Primary Sequence

>Length 308
MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS
CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCEEEEECCCCHHHHCCCCCCHHHHHCCCEEEEECCCCCCCCCHHEECCCCCEEEECCHHHHHHHHHHCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS
43213002000000320001200340231202101103300421211001112221100210110021012002102201210230332232200000111011130003001200431120101002211210020012310000000011322241010010022200000013010021422013220341100002111321132201103122100011020100001200000000200011003332001111322323020000022322040021002101322331110021223344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MFDPETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEHLLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQFHISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEEPLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKSLCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNPRS
1	MUSTER	3szpA	0.182	0.929	2.570	threading_1	M-KLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISA-PSNLTKRMMMPMFNAFMEKYPDIHIELMM---SNQADDLDPTEWDVIFRV--GPQRDSSLIARKIGEVKDILVASPQ-YLSSHPQPTHAEELHQHQLLKGYPLLKTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHPEKVRLFIDFVIGYHL--------------
2	SPARKS	3szpa	0.178	0.929	5.057	threading_2	-MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAP-SNLTKRMMMPMFNAFMEKYPDIHIELMM---SNQADDLDPTEWDVIFRV--GPQRDSSLIARKIGEVKDILVASPQ-YLSSHPQPTHAEELHQHQLLKGYPLLKTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHPEKVRLFIDFVIGYHL--------------
3	PROSPECT2	1iz1a	0.192	0.929	3.897	threading_3	M-EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTP-IYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGKF-GKTCKLADLRAVELTLFPRGGRPSFADEVIGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRS---------------A
4	PPA-I	3szpA	0.178	0.929	4.664	threading_4	-MKLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAP-SNLTKRMMMPMFNAFMEKYPDIHIELMM---SNQADDLDPTEWDVIFRVG--PQRDSSLIARKIGEVKDILVASPQ-YLSSHPQPTHAEELHQHQLLKGYPLLKTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHPEKVRLFIDFVIGYHL--------------
5	HHPRED-l	1al3_A	0.143	0.705	3.512	threading_5	--------------------------------------------------------------------------------------TWPDKGSLYVATTHTQ-ARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATE-ALHLYDDLVMLPCYHWNRSIVVTPEHPLATK-GSVSIEELAQYPLVTYTFGFTGELDTAFNGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVDP-VSDPDLVKLDANGIFSHSTTKIGFRRSTLRSYMYDFIQRFAPHLEDIEAMFKDIKLPE-
6	HHPRED-g	3hhg_A	0.216	0.932	2.940	threading_6	KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMV-LHLLAPLAAKFNERYPHIRLSLVSSE--GYI-NLIERKVDIALRAG--ELDDSGLRARHLFDSRFRVIASPEYLAKH-GTPQSTEELAGHQCLGFTEPGSLNTWAVLDPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLEQTSDKTHPFNAVYYSDKVNLRLRVFLDFLV-------EELG-------
7	SP3	3szpa	0.182	0.929	5.444	threading_7	M-KLDDLNLFRLVVENGSYTSTSKKTMIPVATITRRIQALEDSLNLRLLNRHARKLTLTEAGERFYKDCSPLLERLASMTEEITDECRGASGRIRISAP-SNLTKRMMMPMFNAFMEKYPDIHIELMM---SNQADDLDPTEWDVIFRV--GPQRDSSLIARKIGEVKDILVASPQ-YLSSHPQPTHAEELHQHQLLKGYPLLKTNSQGETVVNSDRGRFQASALNVVRSACSEGLGITLMPDVMLREFLEDGSLVQVLSDWSSNPRDIYMLYNHKDHPEKVRLFIDFVIGYHL--------------
8	SAM-T99	3hhgE	0.211	0.922	4.103	threading_8	KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDSAMPMV-LHLLAPLAAKFNERYPHIRLSL--VSSEGYINLIERK-VDIALRAGELD--DSGLRARHLFDSRFRVIASPE-YLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKHPFNAVYYSDAVNLRLRVFLDFLVE-----------------
9	MUSTER	3hhgE	0.208	0.938	2.502	threading_9	KTNSEELTVFVQVVESGSFSRAAEQLAMANSAVSRIVKRLEEKLGVNLLNRTTRQLSLTEEGAQYFRRAQRILQEMAAAETEMLAVHEIPQGVLSVDS-AMPMVLHLLAPLAAKFNERYPHIRLSLV----SEGYINLIERKVDIALRAG--ELDDSGLRARHLFDSRFRVIASPE-YLAKHGTPQSTEELAGHQCLGFTEPGSLNTDAQGNPYKISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTPFNAVYYSDKANLRLRVFLDFLVEELGNNL-----------
10	SPARKS	1iz1a	0.189	0.929	4.312	threading_10	-MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTP-IYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGK-FGKTCKLADLRAVELTLFPRGGRPSFADEVIGIEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA---------------

Predicted Tertiary Structure


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TM-score=0.663 to 2esnC SCOP code=a.4.5.37	TM-score=0.674 to 2esnC SCOP code=a.4.5.37	TM-score=0.660 to 2esnC SCOP code=a.4.5.37	TM-score=0.784 to 1iz1B SCOP code=a.4.5.37	TM-score=0.636 to 2esnC SCOP code=a.4.5.37