Template-based Modeling Results for ALLA_ECOLI

Submitted Primary Sequence

>Length 160
MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
CEEEEEECCHHHCCCCCEEEECCCCCCEECCCCCEEEEECCEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECCCCEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCEECCCCCCCCCEEEEEEECCCCCCCEEEECCCCCEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
3212112113310111010021332311112202022011102011144400000001022141212021021122011000004211000000222342223201000021310000021000000001331000000011124201112023321022
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIPMKGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
1	MUSTER	1yqcA	0.968	0.988	3.911	threading_1	-KLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPKGEV-FVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
2	SPARKS	1xsra	0.981	0.975	6.682	threading_2	-KLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPK-GEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGG--SCDVESIPEQELCFA
3	PROSPECT2	1xsrA	0.942	0.975	2.786	threading_3	-KLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPKGEVFVVVVA-LGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGG--SCDVESIPEQELCFA
4	PPA-I	1yqcA	0.968	0.988	6.975	threading_4	-KLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPKGEV-FVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
5	HHPRED-l	1xsq_A	1.000	0.944	8.913	threading_5	-KLQVLPLSQEAFSAYGDVIETQQRDFFHI----VERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIP-KGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRG--DNCDVESIPEQELCF-
6	HHPRED-g	1xsq_A	1.000	0.950	7.880	threading_6	-KLQVLPLSQEAFSAYGDVIETQQRDFFHI----VERYHDLALVEILEQDCTLISINRAQPANLPLTIHELERHPLGTQAFIP-KGEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRG--DNCDVESIPEQELCFA
7	SP3	1xsra	0.981	0.975	6.609	threading_7	-KLQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPK-GEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGG--SCDVESIPEQELCFA
8	SAM-T99	1yqcA	0.987	0.981	6.682	threading_8	--LQVLPLSQEAFSAYGDVIETQQRDFFHINNGLVERYHDLALVEILEQDRTLISINRAQPANLPLTIHELERHPLGTQAFIPK-GEVFVVVVALGDDKPDLSTLRAFITNGEQGVNYHRNVWHHPLFAWQRVTDFLTIDRGGSDNCDVESIPEQELCFA
9	MUSTER	3ht1A	0.124	0.806	0.810	threading_9	MK----------------RVHRTDVKAEIVEPGAKETTHRKLIDTPDGADRFVLTEFEVSP-----GSTPPHFHE-WEHEIYVLEGS--MGLVLPDQG-------RTEEVGPGEAIFIPRGEPHGFVTGPGQTCRFLVVAPCERPPVRNVFLSEDPYEYT
10	SPARKS	2y0oa	0.138	0.906	0.778	threading_10	------GITNSYYQKAGIVLTDEEVDQIQLDYGL-GKERKLQLFVYVNTDRYCSKELVLFPGQ----TCPEHRHPPVDETFRCRYGKVYLYVLPPQEDREHYTVWHEIELEPGGQYTIPPNTKHW-FQAGEEG---AVVTESSTSTDKHDIFTDPRILEH

Predicted Tertiary Structure


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TM-score=0.987 to 1yqcA TM-score=0.980 to native SCOP code=b.82.1.14	TM-score=0.979 to 1yqcA TM-score=0.973 to native SCOP code=b.82.1.14	TM-score=0.945 to 1yqcA TM-score=0.968 to native SCOP code=b.82.1.14	TM-score=0.946 to 1yqcA TM-score=0.967 to native SCOP code=b.82.1.14	TM-score=0.987 to 1yqcA TM-score=0.980 to native SCOP code=b.82.1.14

Experimental Structure

Download 1xsqA

SCOP code=b.82.1.14