Template-based Modeling Results for AGAS_ECOLI

Submitted Primary Sequence

>Length 384
MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA
553312121332012202103210300140021022122102200221243322100000000000000000000011123201100020100131222332321000000212211300100210242233001000001320110211222321000001241211000001000000000000012322223103300310320032223002002101323100000100110001100010110000101001112110320020002330000000022222221113001102424320100000132232222111000021430120000000000000000000121112112101302001001001123367
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA
1	SPARKS	3odpa	0.382	0.982	6.662	threading_1	LGYSEDYLKERKGYITAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPNAKIVITGAGSSAFVGNSVVSYLNAKENIKIEAIATTDIVSHPFYYLKKDEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYN-SFLLLPEESNDKGFA-TGSFSTLLSCLLIFNLDKLESIGKQIESISQGEKVLVNNVELKKIVGE--KFKRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSD-YFIAINKEEQEYEDDSFLSLDYLLNAQYAFINGIGPDNPCPTGEVNRVVKGVIIHDY--
2	PROSPECT2	3odpA	0.382	0.982	4.546	threading_2	LGYSEDYLKERKGYITAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPNAKIVITGAGSSAFVGNSVVSYLNAKENIKIEAIATTDIVSHPFYYLKKDEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYN-SFLLLPEESNDKGFA-TGSFSTLLSCLLIFNLDKLESIGKQIESISQGEKVLVNNVELKKIVGE--KFKRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSDYFIAINKE-EQEYEDDSFLSLDYLLNAQYAFILGIGPDNPCPTGEVNRVVKGVIIHDY--
3	PPA-I	3c3jA	0.881	0.940	4.574	threading_3	---NYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPT-TDLVTNPDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFA-LLPAETHDRGFATSSITTASCLAVFAP---ETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRD-NQARVIAIAAESSDIVAAGPHIILPPSRHFI---DVEQAFCFLYAQTFALQSLHGNTPDTP-----------GVIIHPWQA
4	HHPRED-l	2bpl_A	0.201	0.922	3.958	threading_4	IESNLQYDAGDKGHYMQKEIYEQPNAIKNTLTGRISHGQELGPNADE-LLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYRKS---AVRRNSLMITLSQSGETADTLAGLRLSKELGY-LGSLAICNVPGSSLVRE-----SDLALMTNAG-TEIGVASTKAFTTQLTVLLMLVA--S-IVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAY--AAGELKHGPLALIDADMPVIVVAPNNELLEK-LKSNIEEVRARGG--QLYVFADQDAGFVSSDNM-HIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPR---NLAKSVTVE-------
5	HHPRED-g	2bpl_A	0.203	0.922	4.363	threading_5	IESNLQYDAGDKGHYMQKEIYEQPNAIKNTLTGRISHGQVDLGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAG-----IPCDVEIASEFRYRKSRRNSLMITLSQSGETADTLAGLRLSKELGY--LGSLAICNVPGSSLVRESD-----LALMTNAGTEIGVASTKAFTTQLTVLLMLVA--HDIVHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAY--AAGELKHGPLALIDADMPVIVVAPNNEL-LEKLKSNIEEVRARGGQLYVF--ADQDAGFVSSDN-MHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPR------NLAKSVTVE----
6	SP3	3odpa	0.382	0.982	6.586	threading_6	LGYSEDYLKERKGYITAKEICNQPKLWRETYEIILSQREKLKSFLDNFAKKPNAKIVITGAGSSAFVGNSVVSYLNAKENIKIEAIATTDIVSHPFYYLKKDEPTLLISCARSGNSPESTAAVTLAEKIVDDISHLIITCNSEGKLALHAKRNYN-SFLLLPEESNDKGFA-TGSFSTLLSCLLIFNLDKLESIGKQIESISQGEKVLVNNVELKKIVGE--KFKRTVYLGAANAFGLAKESALKVLELTAGKIATLYDTPLGFRHGPKSIIDDETLIVIFFSNDTYAREYEYDLLKEVYSQNGNHKVLAISEYEDKLIEDNSD-YFIAINKEEQEYEDDSFLSLDYLLNAQYAFINGIGPDNPCPTGEVNRVVKGVIIHDY--
7	SAM-T99	2j6hA	0.185	0.927	4.473	threading_7	NLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHVDLSELGPNADLLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASE-----FRYRKSRRNSLMITLSQSGETADTLAGLRLSKEL-GYLGSLAICNVPGSSLVRESD------LALMTNAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKHGLQALPSRIEQMLSQDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEIS--YIHAEAYAAGELKHGPLALIDADMPVIVVAPNNE-LLEKLKSNIEEVRARGGQ--LYVFADQDA-GFVSSDNMHIIEMPHVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNL------AKSVTVE----
8	SPARKS	3c3ja	0.853	0.940	5.721	threading_8	---NYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPT-TDLVTNPDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAF-ALLPAETHDRGFATSSITTASCLAVF---APETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDN-QARVIAIAAESSDIVAAGP---HIILPPSRHFIDVEQAFCFLYAQTFALQSLHGNTPDTP---G--------VIIHPWQA
9	PROSPECT2	3i0zA	0.384	0.969	4.188	threading_9	-GLHYTKEDLLELGITTREIYQQPDVWREAFEFYQAKREEIAAFLQEIADHDYIKVILTGAGTSAYVGDTLLPYFKEVYDERFNAIATTDIVANPATYLKKDVATVLVSFARSGNSPESLATVDLAKSLVDELYQVTI-TCAADGKLALQAHGDDRNLLL-----LQPAVSNDAGFATSSFTSLTTLTEFAVKSERFEVVSSLARKVLDKAEDVKELVD--LDFNRVIYLGAGPFFGLAHEAQLKILELTAGQVATYE-SPVGFRHGPKSLINDNTVVLVFGTTTDYTRKYDLDLVREVAGDQIARRVVLLSDQAFGL-ENVKEVALGCGGVLNDIYRVFPYIVYAQLFALLTSLKVENKPDTPSPTGTVNRVVQGVIIHEYQ-
10	PPA-I	3i0zA	0.390	0.982	4.525	threading_10	-GLHYTKEDLLELGITTREIYQQPDVWREAFEFYQAKREEIAAFLQEIADKDYIKVILTGAGTSAYVGDTLLPYFKEVYDERFNAIATTDIVANPATYLKKDVATVLVSFARSGNSPESLATVDLAKSLVDELYQVTITCAA-DGKLALQAHGDDRNLLLLQPAVSNDAGFATSSFTSLTTLLVFDPTEFAVKSERFEVVSSLARKVLDKAEDVKELVDL--DFNRVIYLGAGPFFGLAHEAQLKILELTAGQVATY-ESPVGFRHGPKSLINDNTVVLVFGTTTDYTRKYDLDLVREVAGDQIARRVVLLSDQ-AFGLENVKEVALGCGGVLNDIYRVFPYIVYAQLFALLTSLKVENKPDTPSPTGTVNRVVQGVIIHEYQ-

Predicted Tertiary Structure


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TM-score=0.808 to 1j5xA TM-score=0.922 to native SCOP code=c.80.1.1	TM-score=0.808 to 1j5xA TM-score=0.922 to native SCOP code=c.80.1.1	TM-score=0.808 to 1j5xA TM-score=0.922 to native SCOP code=c.80.1.1	TM-score=0.798 to 1j5xA TM-score=0.997 to native SCOP code=c.80.1.1	TM-score=0.825 to 1j5xA TM-score=0.852 to native SCOP code=c.80.1.1

Experimental Structure

Download 3c3jA

SCOP code=c.80.1.1