Template-based Modeling Results for ACRA_ECOLI

Submitted Primary Sequence

>Length 397
MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEEEEEEEEEEEEEEEEEECCCCEEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEECCEECCCCCEECCCCCCCEEEEEECCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCEEEECHHHHEECCCCCEEEEEECCCCEEEEEEEEECEEECCEEEEECCCCCCCEEEECCHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS
5543311100000000000000010333323322342120100102212021112000102011102010312000121003322202211000200111011102101010120110022021013102411323311322022011102201110100200021021212102010201010020202200002222221000011013010001111210020122134222433323020100022224123200010010101431010000000212322001100010102222232000012200112442110000013332021120201211221000131032212000200230232120202223233333222223344345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKNRGFTPLAVVLMLSGSLALTGCDDKQAQQGGQQMPAVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQSSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQPEQSKS
1	MUSTER	2v4dM	0.623	0.821	3.784	threading_1	-------------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVAD-------QAVS-------KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQATALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGVEVKTVP--------------------
2	SPARKS	3lnna	0.277	0.829	6.162	threading_2	--------------------ALRHEGERLVPAESPLRRTLAVAPATRETVAAPFNLPAMIEPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSA----DLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGLAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----------VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQPHE-GIVVPMSAIVQSG-FYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND----------------------------
3	PROSPECT2	3lnnA	0.271	0.829	5.723	threading_3	A--------------------LRHEGERVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEADKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQ----ANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGHILAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY------------VGQSATVKF-DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQPH-EGIVVPMSAIVQS-GFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND----------------------------
4	PPA-I	2v4dM	0.623	0.821	9.554	threading_4	-------------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVAD-------QAVS-------KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQATALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGVEVKTVP--------------------
5	HHPRED-l	1vf7_A	0.627	0.594	5.814	threading_5	--------------------------------------------------TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS-------TQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVEQARINLR-------YTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERADNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEG-------------------------------------------------------------------------------------------------
6	HHPRED-g	1vf7_A	0.653	0.594	6.041	threading_6	--------------------------------------------------TLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS-------TQEQAQRYKLLVADQAVSKQQYADANAAYLQS-------KAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERADNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEG-------------------------------------------------------------------------------------------------
7	SP3	3lnna	0.280	0.829	5.792	threading_7	--------------------ALRHEGERLVVPASPLRRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD----LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGILAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----------VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQPH-EGIVVPMSAIVQSG-FYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND----------------------------
8	SAM-T99	2v4dM	0.629	0.821	9.365	threading_8	-------------------------------------PEVGIVTLEAQTVTLNTELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLAS-------TQEQAQRYKLLVADQAVSKQQYADANAAYLQS-------KAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQLQEGVKQKAILAPQQGVTRDLKGQATALVVNAQNKVELRVIKADRVIGDKWLVTEGLNAGDKIITEGLQFVQPGVEVKTVP--------------------
9	MUSTER	3lnnA	0.280	0.829	3.077	threading_9	--------------------ALRHEGERVVPAESPLRRTLAVAPATRETVAAPFNLPAMIEAAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD----LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGILAVRSPINGRVVDLNAATGAYWNDTTAS-LMTVADLSHVFVTANAQEKDLGHVY----------VGQSATVKF---DAYDDPQPGKVRYVGQILDADTRTTKVRMVFDNPDGRLRPGMFAQATFLSQPHE-GIVVPMSAIVQS-GFYTRAFVEVAPWQFEPRVIKLGAQIGDRMEVKSGLSAGDRVVVKEGVLLND----------------------------
10	SPARKS	3h94a	0.214	0.741	4.532	threading_10	----------------------------------TQNLGVKTATVTRGPLTFAQSFPANVSEYQYAIVQARAAGFIDKVYLTVGDKVQKGTPLLDLTI----PDWVEAQSEYLLLRE------------------TGGTATQTEGILERLRLAGMP-EADIRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNV--VAKIQGMDPVWVTAAIPESIAWLVK------------DASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWLQLNTA-SEPMLLIPSQALIDTG-SEQRVITVDADGRFVPKRVAVFQASQGVTALRSGLAEGEKVVSSGLFLI------------------------------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.450 to 1kd9A TM-score=0.774 to native SCOP code=h.1.3.1	TM-score=0.450 to 1kd9A TM-score=0.774 to native SCOP code=h.1.3.1	TM-score=0.456 to 1gjxA TM-score=0.662 to native SCOP code=b.84.1.1	TM-score=0.480 to 1iyuA TM-score=0.553 to native SCOP code=b.84.1.1	TM-score=0.450 to 1kd9A TM-score=0.774 to native SCOP code=h.1.3.1

Experimental Structure

Download 2f1mC

SCOP code=h.1.3.1