Template-based Modeling Results for ABGT_ECOLI

Submitted Primary Sequence

>Length 508
MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS
CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCEECCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS
5533323322311200100240123112100000010001000110132120102133432201010001230011001200310111011000000000000021010010001200230223000000000000010011000000000000001001200000000000000000000001000000000001200310223020000000000000000000000000110011202323232334232123213100320010000000000111023201122222321231111300000000000000101011142022121003101200440000000000000000002101002000000020032021201100000000000000000000000010000000001101010100100020110011000100000000000013124303000001110211000100000000001002022022122424
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSMSSIPSSSQSGKLYGWVERIGNKVPHPFLLFIYLIIVLMVTTAILSAFGVSAKNPTDGTPVVVKNLLSVEGLHWFLPNVIKNFSGFAPLGAILALVLGAGLAERVGLLPALMVKMASHVNARYASYMVLFIAFFSHISSDAALVIMPPMGALIFLAVGRHPVAGLLAAIAGVGCGFTANLLIVTTDVLLSGISTEAAAAFNPQMHVSVIDNWYFMASSVVVLTIVGGLITDKIIEPRLGQWQGNSDEKLQTLTESQRFGLRIAGVVSLLFIAAIALMVIPQNGILRDPINHTVMPSPFIKGIVPLIILFFFVVSLAYGIATRTIRRQADLPHLMIEPMKEMAGFIVMVFPLAQFVAMFNWSNMGKFIAVGLTDILESSGLSGIPAFVGLALLSSFLCMFIASGSAIWSILAPIFVPMFMLLGFHPAFAQILFRIADSSVLPLAPVSPFVPLFLGFLQRYKPDAKLGTYYSLVLPYPLIFLVVWLLMLLAWYLVGLPIGPGIYPRLS
1	PROSPECT2	1gw5b	0.096	0.882	2.011	threading_1	SKYFTTNKKGEIFELVIAAMTVGKDVSSLFPDVVLKKLVYLYLMNYAK---------------------SQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSVANAVAALSEISESHPNSNLLDLNPQNINKLLTFILDCLSNYNPKDDREAQSICERNSAVVLSAVKVLM------KFLELLPKDSDYYNMLLKKLAPPLVTPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRL---------ASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKV-----NYVVQEAIVVIRDIFRKYPNKYESII-ATLCENLDSLDEPDARAAMIWIVGE-----YAERIDNADELLESFLEGFHDES-------------TQVQLTLLTAIVKLFLKKPSEHKPPNAFV
2	PPA-I	3o7pA	0.128	0.705	2.060	threading_2	--------------------------------------------------------------------------------------RSYIIPFALLCSLFFLWAVANNLNDILLPQFQQAFFQAGLIQSAFYFGYF----------IIPIPAGILMKKLSAGIITGLFLYALGAAL-FWPAAEIMNYTLFLVGLFIIAAGLGPESSGHFNLAQTFASFGAIIAVVFGQSLI--------LSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVPYMIIVAIVLLPALQSDNHSDAKQGSFSASLSRLARRHWRWAVLAQFCYIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFSLGITKYGSSFIVMTIIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIFARFRSQT---------------------------------------------
3	PROSPECT2	1qgra	0.100	1.000	1.988	threading_3	MENPGNSDANARREVKNYVLHTLGTETYRPSSASQCVAGIACAEIPVNQWPENVTNPNSTEHMKESTLIDPEQLQDKSNEILTAIKEEPSNNVKLAATNALLNSSERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPPFIKEHIKNPDWRLEGPEPSQLKPLRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLLQSLLCATLQNVLRKVQLVEVLGGEFLKYMEAFYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVLSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPGDEDHTA
4	PPA-I	3l1lA	0.151	0.719	1.857	threading_4	---------------------------------------------------------------------------------------AHKVGLIPVTLMVSGAIMGSGVFLLPANLAST-GGIAIYGWLVTIIGALGLSMV------YAKMSFLD-------PSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVILSYFFPILKDPWVLTITCVVVLWIFVLLNI---------------------VGPKMITRVQAVATVLALIPIVGIAVFG------WFWFRGETYMAAIQSTLNVTLWSFIGVESASV--AAGVVKN----PKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFT--LVPYLYTCAALLLLGHGHFGIAFLYCIWAAKEVMWSFVTLMVITAMYAL-------NYNRLH
5	PROSPECT2	1w63A	0.074	0.927	1.923	threading_5	MPAPREEDNTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIIGYLGAMLLLD-----------------ERQDVHLLMTNCIKNDLNHSTQFGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE----LMEMFLPATKNLLNEKNHGVLHTSVVLLTSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRIL----------------GRNDDDSSEAMNDILAQVATNTVGNAILYETVLTIMDIKSESGLRVLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKDCASGIFLAAEKYAPSKRWHIDTIMVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQVAAWLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSVTRGYALTAIMKLSVNRIKKVVSIYGSSIKYDHMPVMEK
6	PPA-I	3zuxA	0.163	0.569	1.843	threading_6	-----------------------------------------------------------------------NILSKISSFIGKTF----SLWAALFAAAAFFAPDIPWLLGIIMFGMGLTLKPLFKHPKVVIIGVIAQFAI------MPATAWCLSKLLNLPAEIAVGVILVGCCPG--------------GTASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLML-------------------AGEMLEIQAAGMLMSIVKMVLLPIVLGLIV------------HKVLGSKTEKLTDALPLVSVAAIVLI----------IGAVVGASKGKIMESGLLIFAVVVLHNGIGYL----LGFFAAKWTG--------LPYDAQKALTIEVGMQNSGLAAALAAAHFAVPGALFSVWHNISGSLLATYWAAKA-----------------------------------------------------------------------
7	PROSPECT2	1b3ua	0.093	0.931	1.923	threading_7	AAADGDDSLYPIAVLIDELSTIALALGVERTRSELLPFLTVLLALAEQLGTF------------TTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCS-DDTPMVRRAAASKLGEFAKV---LELDNVKSEIIPMFSNLASDE---QDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLS---ADCRENVIMSQILPCIKELVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLEVIGIRQLSQSLLPAIVELAEDAKIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPTTLFCINVLSEVCGQ-----DITTKHMLPTVLRMAGDPVLQKIGPILDNSTLQSEVKPILEFAQEALTVLSLA--------
8	PPA-I	3g61A1	0.082	0.650	1.802	threading_8	-----------------------------------------------------------VSVLTMFRYAGWLDRLYMLVGTLAAI-----IHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYI---QVSFWCLAAGRQIHKIRQKFFHADVGELNTRLTDDVSKI-------NEGIGDKIGMFFQAMATFFGGFII------GFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVF---KIIDNKPSIDSFSGWQLTLLLLAIVPIIAIAGVVEMKM------LSGQALKDKKELEGSGKIATEAIENFRTVVSLTR---EQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAACFRFGAYLV----TQQMT----------------------------------------------------------------------------------
9	PROSPECT2	1jdha	0.089	0.880	1.903	threading_9	AVVNNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNT--------------------NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQLVQNCLWTLRNLS-----------DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNN----YKNKMMVCQVGGIEALVRTVEDITEPAICALRHLTSRHQEAEMAQNAVRLHLPVVVKLWPLIKATVGLIRNLALCPIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLSPIENIQRVAAGV-----------LCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM---------------S
10	PPA-I	1kpkA	0.131	0.738	1.708	threading_10	---------------------------------------------------------------------QAARLRRRQLIRQLLERDKTPAILFMAAVVGTLVGLAAVAFDKGVAWLQNQADNYPLLLTVAFLCSAVLAMFGYFLVPVKFFGGLGTLGGGMVPTVQIGGNIGRMVLDFRLKGDEARHTLLATGAAAGLAAAFNRPQFRYTLISIKAVFIGVIMSTIMYRIF--------NHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWV------LGMQDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATASMGMLVFIFVARVITTLLCFSSGAPGLGTVLGTAFGMVAVELFPQYHLEAGTFAIAGM---GALLAASIR-APLTGIILVLEMTDNYQIITGLGATLLAQ----FTGGKPLYSAILARTLAKQEAEQL------------------------------------------

Predicted Tertiary Structure


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TM-score=0.540 to 2q6hA SCOP code=f.54.1.1	TM-score=0.636 to 2vglB SCOP code=i.23.1.1	TM-score=0.515 to 1pv6A SCOP code=f.38.1.2	TM-score=0.855 to 1kpkA SCOP code=f.20.1.1	TM-score=0.512 to 1w63C SCOP code=i.23.1.1