Template-based Modeling Results for AAS_ECOLI

Submitted Primary Sequence

>Length 719
MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE
CHHHHHHHHHHHEEEEEEECCEECCCCCCEEEEECCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCCEEECCEECCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCEECHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCEECCCEEEECCCCCEEEEECCCCEEEECCEEECHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE
31110020002000102020112034332000000000000000000002220000001200120002001200100101132120022002104412100001311001101003013000000331201000010210221210213110213111201010021131212422313201310020012001102121323310020011003411212100111321200022011101100200241214021000001100200000000002210001002101230000002204020000032002201111133302201000022142312213101100220133123242333110000001113220100000010000001101200312231100000000000000000000011001000001112131002002321000000000000000311232201200000001340332012101321102002000012001000111222232100121011010100133224310100020010010103134312232321310212133000000000100430001000113100101010000300120012013111000001113340100000123341223100200342202302001102002401211201010210221133235444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGILLGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVIFPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQITLHILPPTQVAMPDAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFGAGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAIARRRMPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTRDKLQQYAREHGVPELAVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE
1	MUSTER	1mdfA	0.214	0.722	2.689	threading_1	-------------------------------------------------------------------------------------------------------------------------------------------------------------------MLKGFT-PWPDEL-AETYRKNG--------------CWAGETFGDLLRDRAAKYGDRIAITC--GNTHWSYRELDTRADRLAAGFQKLGIQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQKLPTLNIIVAGEAEE-------FLPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSPGVLGVLYAGGRVVLSPSP-SPDDAFPLIEREKVTITALVPPLAMVWMDAARRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDPEEIIVNTQGKPMPYDESRVWDDHDPGETGHLLTRGPYTIRGYYKAE---------EHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFII-EAPKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISEKLLAG-
2	SPARKS	3a9ua	0.215	0.700	4.314	threading_2	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFIFRSKLP-DIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFAR----EDVKVMCVDSAPDGCLHFSEL---TQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPK-FEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDKHDLSSLRMIKSE---LEDTVRAKFP---QARLGQGYGMTEAGPVLAMCLPFDIKPGACGTVVRNAEMKIVDPETRNQPGEICIRGDQIMKGYLNDP---------EATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSQATEDEIKQYISKQ-VIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAGI-----
3	PROSPECT2	1md9a	0.205	0.719	4.274	threading_3	L-----------------KGFTPWP--------------------------------------------------------------DELAETYRKNG-----------------------------------------------------------------------------------------------------CWAGETFGDLLRDRAAKYGDRIAITCG--NTHWSYRELDTRADRLAAGFQKLGQQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYYRSLARQVQSKLPTLKNIIVAGEAEEFLP-------LEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPAHNYPLSSPGVLGVLYAGGRVVLSPSP-SPDDAFPLIEREKVTITALVPPLAVWDAASSRRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGAEGLVNYTRLDDPEEIIVNTQGKPSPYDESRVWDDHDPGETGHLLTRGPYTIRGYYKAEE---------HNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAV--SPDQFLGERSCVFIIDEAPKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISEKLLAG-
4	PPA-I	1mdfA	0.208	0.723	4.326	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLKGFTPWPDELAETYRKNGC----------WAGETFGDLLRDRAAKYGDRIAITC--GNTHWSYRELDTRADRLAAGFQKLGIQKDRVVVQLPNIKEFFEVIFALFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSYRSLARQVQSKLPTLNIIVAGEAEEFLPLED-------LHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSPGVLGVLYAGGRVVLSPSP-SPDDAFPLIEREKVTITALVPPLAMVWMDAARRDDLSSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDPEEIIVNTQGKPMPYDESRVWDDHDPGETGHLLTRGPYTIRGYYKAE---------EHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQFLGERSCVFIIDEAPKAAELKAFLRERGLAAYKIPDRVEFVESFPQTGVGKVSKKALREAISEKLLAG-
5	HHPRED-l	1pg4_A	0.173	0.782	3.292	threading_5	----------------------------------------------------------------------------------------------------------------HKHAI---PANIADRCLINP-EQDPDTFWGEQGKILD------WI--------TPYQKVKNTS-FAP------------GNVSIKWYEDGTLNLAANCLDHLQEN-GDRTAIIDSQSKHISYRELHRDVCRFANTLLDGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKAVTSEHVIVLKRTGSDIDWQEGRRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFENWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGEGTDRSSLRILGSVGEPINPEAWEWYWKKIGCPVVDTWWQTETGGFMITPLPGELKAGSATRPFFGVQPALVDNEGHATEGNLVITDSGQARTLFGDHERFEQTYF-------STFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNEPSPAEVRNWVRKE-IGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD-----
6	HHPRED-g	2d1s_A	0.207	0.713	2.661	threading_6	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DEN---IVVGPKPFYPIEEGSAGTQLRKYMERYAKLGAIANAVTGVDYSYAEYLEKSC-LGKALQYGLVVDGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTTTIKTIVI--LDSKVDYRGYQCLDTFIKRNTPPGFTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIQVSPGTAVLTVVPFHHGFGMF-TTLGYLICGFRVVML-TKFDEETFLKTLQDYKCTSVILVPTLFAILNKSENKYDLSNLVEIASGGAPLSKEVGEAVARRFNLGVRQGYGLTETTSAIIITPEGDDKPGASGKVVPLFKAKVIDLDTKNRRGEVCVKGPMLMKGYVNNPE---------ATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAGVPDPVAGELPGAVVVGKNMTEKEVMDYVASQ-VSNAKLRGGVRFVDEVPKGLTGKIDGRAIREILKKPV----
7	SP3	3a9ua	0.215	0.700	4.423	threading_7	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFIFRSKLP-DIYIPKNLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFAR----EDVKVMCVDSAPDGCLH---FSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGLYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPK-FEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDKHDLSSLRMIKSE---LEDTVRAKF---PQARLGQGYGMTEAGPVLAMCLPFDIKPGACGTVVRNAEMKIVDPEPRNQPGEICIRGDQIMKGYLNDP---------EATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSQATEDEIKQYISKQ-VIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAGI-----
8	SAM-T99	3a9uA	0.224	0.665	3.542	threading_8	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARE----DVKVMCVDSAPDGCLHFSELTQADENEAP---QVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMP-KFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDKHDLSSLRMI-------KSELEDTVRAKFPQRLGQGYGMTEAGPVLAMCLAFDIKPGACGTVVRNAEMKIVDPEPRNQPGEICIRGDQIMKGYLND------------------KEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDEDAGEVPVAFVVKSEATEDEIKQYISKQ-VIFYKRIKRVFFIEAIPKAPSGKILRKNLKEKLAGI-----
9	MUSTER	1ba3A	0.196	0.718	2.602	threading_9	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAKNIKKGPAPFYPLEDGTAGEQLHKAMKRYPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLTNHRIVVCSENSLQFFMPVLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSDYQGFQSMYTFVTSHLPPGFNEYDFVPESFDDKTIALIMNSSTGLPKGVALPHRTACVRFSHARDPIQIIPDTAILSVVPFHHGFGMFTTLGYLIC--FRVVLMY-RFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLKYDLSNLHEIASGGAPLSKEVGEAVAKRFHLGIRQGYGLTETTSAILITPEGDDKPGAVGKVVPFFEAKVVDLDGVNQRGELCVRGPMIMSGYVNNP---------EATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIFDAGVAGLPDDDAGELPAAVVV-KTMTEKEIVDYVASQ-VTTAKKLGGVVFVDEVPKGLTGKLDARKIREILIKAKK---
10	SPARKS	2vzea	0.181	0.708	4.286	threading_10	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HQEVPAKFNFASDVLDHWADMEKAGKRPPSPALWWNGKGKMWNFRELSENSQQAANVLSGCGLRGDRVAVVLPRVPEWWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLN---FKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFVHLLPKDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDSSYKFPHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGLTCMVSKTMKIKPGYMGTAASCYDVQIIDDKGPGTEGDIGIRVKPIFSGYVDN----------PDKTAANIRGDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVETAVISSPDPVRGEVVKAFVVDPEQLTKELQQHVKSV-TAPYKYPRKIEFVLNLPKTVTGKIQRAKLRDKEWK------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.841 to 1mdfA SCOP code=e.23.1.1	TM-score=0.847 to 1mdfA SCOP code=e.23.1.1	TM-score=0.698 to 1ba3A SCOP code=e.23.1.1	TM-score=0.838 to 1mdfA SCOP code=e.23.1.1	TM-score=0.843 to 1mdfA SCOP code=e.23.1.1