Template-based Modeling Results for AAEA_ECOLI

Submitted Primary Sequence

>Length 310
MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCEEEEEEECCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEECCCCCCCCEECCCCEEEEEEECCCEEEEEEECHHHHHHHHCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG
5432233102000000000000000000011112132132010101002000311010110103222202211000101323112102102110111112022222111122311331113320220131122022101301111120111032020102020100112023011013210000002122010001022210300332220201111323202010100121123222232330112131222102001101010202233330011000000001143343323202012012203425
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTLIRKFSRTAITVVLVILAFIAIFNAWVYYTESPWTRDARFSADVVAIAPDVSGLITQVNVHDNQLVKKGQILFTIDQPRYQKALEEAQADVAYYQVLAQEKRQEAGRRNRLGVQAMSREEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADGWVTNLNVYTGEFITRGSTAVALVKQNSFYVLAYMEETKLEGVRPGYRAEITPLGSNKVLKGTVDSVAAGVTNASSTRDDKGMATIDSNLEWVRLAQRVPVRIRLDNQQENIWPAGTTATVVVTGKQDRDESQDSFFRKMAHRLREFG
1	MUSTER	3fppB	0.237	0.777	1.897	threading_1	--------------------------------RPGDLQQ-GKLDALRKVD-AQVSGQLKTLSVAIGDKVKKDQLLGVIDPKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTAVSATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGQLTRYEGQIKDVL---------------PTPEKVND----AIFYYARFEVPN-PNGLLRLDMTAQVHIQLTDVKNVLT---------------
2	SPARKS	3fppa	0.219	0.781	3.954	threading_2	---------------------------------PGDLQQTGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMQAEAELKLARVTYSRQQRLQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGQLTRYEGQIKDVL---------------PTPEKVNDAIFY----YARFEVPN-PNGLLRLDMTAQVHIQLTDVKNVLT---------------
3	PROSPECT2	1t5eA	0.225	0.687	3.495	threading_3	-------------------------------------TEPGRTNARIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVAD------QAVSKQQYAD-------ANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQAMATVQQLDPIYVDVTQPSTALLRLRNAAKVSLKLEDGSQPLEGRLEFSE---------------VSVDEG------TGSVTIRAVFPN-PNNELLPGMFVHAQL-------------------------
4	PPA-I	3fppB	0.226	0.784	3.344	threading_4	--------------------------------RPGDLQQSKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTAVSATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGQLTRYEGQIKDVLPTPEKVNDA-------------------IFYYARFEVPNPNGL-LRLDMTAQVHIQLTDVKNVLT---------------
5	HHPRED-l	3ne5_B	0.176	0.732	4.336	threading_5	------------------------------------QSFPANVSYNYAIVQARAAGFIDKVYPLVGDKVQKGTPLLDLTIPDWVEA----QSEYLLLRETGGTATQTEGILERLRLAGMPEAD------------------IRRLIATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTVPARDKTLTIRKWTLLPGVDAATR---------------------TLQLRLEVD-NADEALKPGMNAWLQL-NTAS-EPMLLIPSQALIDTGSEQ-
6	HHPRED-g	2f1m_A	0.234	0.690	4.301	threading_6	------------------------------------TTEPGRTSAYIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQALATVQQLDPIYVDVTQSSND-----------VSLITIKFPQDGTLEFSDVTV---------------DQT------TGSITLRAIFPN-PDHT--PG-FVRARLE------------------------
7	SP3	3fppa	0.219	0.781	3.837	threading_7	---------------------------------PGDLQQSGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMEAEAELKLARVTYSRQQRLQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGQLTRYEGQIKDVL---------------PTPEKVNDAIF----YYARFEVPN-PNGLLRLDMTAQVHIQLTDVKNVLT---------------
8	SAM-T99	2f1mC	0.226	0.671	3.847	threading_8	---------------------------------------------RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGTALATVQQLDPIYVDVTQSSNDRLKQELANVSLITSDGIKFPQDGTLEFSDVTVDQT---------------------TGSITLRAIFPNPDHTP------------------------------------
9	MUSTER	2f1mC	0.258	0.700	1.741	threading_9	-------------------------------------TTEGRTSARIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLGTQYISKQEYDQALADAQQANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQALATVQQLDPIYVDVTQSSNDRGTLKENGKAKVSLIGIKFPQDGTLEFSD---------------VTVDQTTGSITLRAIFPVRARLEE-----------------------------------------
10	SPARKS	1t5ea	0.216	0.732	3.023	threading_10	-------------------------------------TEPGRTNARIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRY------KLLVADQAVSKQQYADANAAYLQSKAAVEQARINLR-------YTKVLSPISGRIGRSAVTEGALVTNGQAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLK-LEDGSQYPLEGRLEFSEVSVDEG------TGSVTIRAVFPN-PNNELLPGMFVHAQL-------------------------

Predicted Tertiary Structure


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TM-score=0.472 to 1lrzA SCOP code=a.2.7.4	TM-score=0.504 to 1skvA SCOP code=a.30.5.1	TM-score=0.427 to 1o78A SCOP code=b.84.1.1	TM-score=0.471 to 1qjoA SCOP code=b.84.1.1	TM-score=0.495 to 1lrzA SCOP code=a.2.7.4