Template-based Modeling Results for YTFH_ECOLI

Submitted Primary Sequence

>Length 126
MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
CCCCCHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
553232223233232123301012003102220000000003222320210234022002210120022024211021101221111010100320220030010002002300210121223335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
1	MUSTER	1yyvA	0.870	0.857	3.244	threading_1	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR---GVSE--LAQSLQALEQDGFLNRVSYPVVPPHVEYSLTP-LGEQVSDVAALADWIELNLPQVLAQRE----
2	SPARKS	1yyva	0.927	0.865	3.829	threading_2	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR--GGVSE--LAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSD-VAALADWIELNLPQVLAQRE----
3	PROSPECT2	1yyvA	0.862	0.865	2.026	threading_3	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR----GGVSELAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSDVA-ALADWIELNLPQVLAQRE----
4	PPA-I	1yyvA	0.853	0.865	5.548	threading_4	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRRG--GVS--ELAQSLQALEQDGFLNRVSYPVVPPHVEYSLTP-LGEQVSDVAALADWIELNLPQVLAQRE----
5	HHPRED-l	1yyv_A	0.927	0.865	4.344	threading_5	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR--GGVSE--LAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSD-VAALADWIELNLPQVLAQRE----
6	HHPRED-g	1yyv_A	0.927	0.865	4.366	threading_6	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR--GGVSE--LAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSD-VAALADWIELNLPQVLAQRE----
7	SP3	1yyva	0.917	0.865	3.621	threading_7	--------QLREGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR--GGVS--ELAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSD-VAALADWIELNLPQVLAQRE----
8	SAM-T99	1yyvA	0.925	0.849	4.844	threading_8	----------REGNLFAEQCPSREVLKHVTSRWGVLILVALRDGTHRFSDLRR--GGVSE--LAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGEQVSD-VAALADWIELNLPQVLAQRE----
9	MUSTER	1z7uA	0.280	0.849	3.085	threading_9	-----------SNATTDKQTSINLALSTINGKWK-LSLDELFQGTKRNGELRA-LDGITQRVLTDRLRE-EKDGLVHRESFNELPPRVEYTLTPEGYALYDALSSLCHWGETFAQKKARLN-----
10	SPARKS	2fswa	0.364	0.786	3.369	threading_10	------------RKISDEECPVRK-SQIFAGKWTLLIIFQINRRIIRYGELKRAIPGISEKL-IDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEKVLPIIDEIAKFGENL-------------

Predicted Tertiary Structure


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TM-score=0.864 to 1yyvA SCOP code=a.4.5.69	TM-score=0.904 to 1yyvA SCOP code=a.4.5.69	TM-score=0.884 to 1yyvA SCOP code=a.4.5.69	TM-score=0.851 to 1yyvA SCOP code=a.4.5.69	TM-score=0.866 to 1yyvA SCOP code=a.4.5.69