Template-based Modeling Results for RUVX_ECOLI

Submitted Primary Sequence

>Length 138
MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
CCCEEEEEECCCCEEEEEEECCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHCCC
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
541100000102210000001311000110100202322310210130032221210000011123223221011022002201120202010011201111011001322123222312000000000012102424
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
1	MUSTER	1ovqA	1.000	1.000	3.887	threading_1	MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
2	SPARKS	1ovqa	1.000	1.000	4.646	threading_2	MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
3	PROSPECT2	1nmnA	0.992	0.870	2.531	threading_3	-SGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLST-----------------VGKVDSASAVIILESYFEQGY
4	PPA-I	1ovqA	1.000	1.000	5.353	threading_4	MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
5	HHPRED-l	1nu0_A	1.000	0.913	6.770	threading_5	-SGTL-AFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLN-DGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEA-------GGYRALNKGKVDSASAVIILESY-EQG-
6	HHPRED-g	1vhx_A	0.333	0.935	5.726	threading_6	-SLRILGLDLGTKTLGVALSDE-GWTAQGIETIKINEAEGDLSRLSELIKDYTIDKIVLGFPKN-NGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT-AAEK-LIAADVSRQKRKKVIDK--A--ILQGYLDSLN
7	SP3	1ovqa	1.000	1.000	4.790	threading_7	MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
8	SAM-T99	1ovqA	1.000	1.000	6.046	threading_8	MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY
9	MUSTER	1vhxA	0.321	0.949	3.304	threading_9	-SLRILGLDLGTKTLGVALSDE-GWTAQGIETIKINEGDYGLSRLSELIKDYTIDKIVLGFPKN-NGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTAAEK--LIAADVSRQKRKKVIDKAA--VILQGYLDSLN
10	SPARKS	1vhxa	0.321	0.949	3.922	threading_10	-SLRILGLDLGTKTLGVALSDE-GWTAQGIETIKINEAEGDLSRLSELIKDYTIDKIVLGFPKN-NGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTTAAE--KLIAADVSRQKRKKVIDK--AAVILQGYLDSLN

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.990 to 1ovqA TM-score=0.668 to native SCOP code=c.55.3.8	TM-score=0.993 to 1ovqA TM-score=0.655 to native SCOP code=c.55.3.8	TM-score=0.993 to 1ovqA TM-score=0.655 to native SCOP code=c.55.3.8	TM-score=0.725 to 1vhxA TM-score=0.925 to native SCOP code=c.55.3.8	TM-score=0.990 to 1ovqA TM-score=0.668 to native SCOP code=c.55.3.8

Experimental Structure

Download 1nu0A

SCOP code=c.55.3.8