Template-based Modeling Results for YOBA_ECOLI


  Submitted Primary Sequence

>Length 124
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCEECCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
4421010011000000000000001002202421122312023012101010122032111002001242331322202123333220001023214302000100000211141412010213
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAAPQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYTVDWHVVSVDGHKTKGHYTFSVK
1MUSTER1lyqB0.4080.7902.587threading_1-------------------------AHPELKSSVPQADSAV-AAPEKIQLNFSENLTVKFSGAKLTMTGMKGMSSHSPMPVAADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
2SPARKS1m42a0.4020.7822.745threading_2--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
3PROSPECT21m42a0.3920.7821.767threading_3--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPMAVKGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
4PPA-I1lyqB0.4080.7903.249threading_4-------------------------AHPELKSSVPQADSAV-AAPEKIQLNFSENLTVKFSGAKLTMTGMKGMSSHSPMPVGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
5HHPRED-l1lyq_A0.4040.7585.563threading_5-------------------------AHPELKSSVPQADSAVA-APEKIQLNFSENLTVKFSGAKLTMTGMK---SHSPMAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTV-
6HHPRED-g1lyq_A0.4210.7664.704threading_6-------------------------AHPELKSSVPQADSAV-AAPEKIQLNFSENLTVKFSGAKLTMTGMK---SHSPMPPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
7SP31m42a0.4020.7822.545threading_7--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
8SAM-T991lyqB0.3980.7904.120threading_8-------------------------AHPELKSSVPQADSAVA-APEKIQLNFSENLTVKFSGAKLTMSSHSPMPVAAKVAPGADPKSMVIIPREPLPAGTYRVDWRAVSSDTHPITGNYTFTVK
9MUSTER1ot4A0.4020.7822.507threading_9--------------------------HPKLVSSTPAEGSEG-AAPAKIELHFSENLVTQFSGAKLVMTAMPGMEHSPAVSGGGDPKTMVITPASPLTAGTYKVDWRAVSSDTHPITGSVTFKVK
10SPARKS3c12a0.1880.8150.740threading_10---------------------DQVLKGAALVGHNPSAQVAIDATGSAKGVVAATS--AGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDRMAAGKYGITATQTDTAGAKSKLATYVDAP

  Predicted Tertiary Structure

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TM-score=0.784 to 1lyqB
SCOP code=b.1.18.17
TM-score=0.762 to 1lyqB
SCOP code=b.1.18.17
TM-score=0.678 to 1ot4A
SCOP code=b.1.18.17
TM-score=0.726 to 1ot4A
SCOP code=b.1.18.17
TM-score=0.777 to 1lyqB
SCOP code=b.1.18.17