Template-based Modeling Results for YOAI_ECOLI

Submitted Primary Sequence

>Length 34
MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG
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--------10--------20--------30

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
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--------10--------20--------30

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG
5423111100000000000000000011002234
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--------10--------20--------30

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG
1	MUSTER	2kv5A	0.258	0.912	1.548	threading_1	MKD---LMSLVIAPIFVGLVLEMISRVLDEEDDS
2	SPARKS	1b0nb1	0.233	0.882	1.236	threading_2	ELDQEWVELMVEAKE-ANISPEEIRKYLLLN---
3	PPA-I	2kv5A	0.258	0.912	1.300	threading_3	MKD---LMSLVIAPIFVGLVLEMISRVLDEEDDS
4	SP3	3dl8c	0.125	0.941	1.023	threading_4	ISVIIFSLAIGVYLWILDLTFTKIISFILSLR--
5	MUSTER	1iijA	0.290	0.912	1.464	threading_5	ASPVTFIIATVVGVLLFLILVVVV---ILIKRRR
6	SPARKS	1b0nb	0.233	0.882	1.218	threading_6	ELDQEWVELMVEAKE-ANISPEEIRKYLLLN---
7	PPA-I	2axtm	0.088	1.000	1.214	threading_7	VNQLGLIATALFVLVPSVFLIILYVQTESQQKSS
8	MUSTER	1spfA	0.194	0.912	1.363	threading_8	LRIPVNLKRLLVVVVVVVLVVVVIVGALLM---G
9	SPARKS	1dpjb	0.207	0.853	1.177	threading_9	-TDQQKVSEIFQSSKEKLQGDAKVVSDAFK----
10	PPA-I	1iijA	0.250	0.941	1.204	threading_10	--EQRASPVTFIIATVVGVLLFLILVVILIKRRR

Predicted Tertiary Structure


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TM-score=0.636 to 2r2vA SCOP code=h.1.3.1	TM-score=0.644 to 1kd9A SCOP code=h.1.3.1	TM-score=0.460 to 1y7yA SCOP code=a.35.1.3	TM-score=0.636 to 2r2vA SCOP code=h.1.3.1	TM-score=0.745 to 2r2vA SCOP code=h.1.3.1