Template-based Modeling Results for YOAB_ECOLI


  Submitted Primary Sequence

>Length 114
MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
CCEEEECCCCCCCCEEEECCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
341211223231010010110000011132232202210120021022003413032210010000011020011003002210322210010000022124402010100022
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLAQIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
1MUSTER3gtzA0.9211.0004.633threading_1LSIVRIDAEDRWSDVVIYNNTLWYTGVPENLDADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
2SPARKS3gtza0.9211.0004.439threading_2LSIVRIDAEDRWSDVVIYNNTLWYTGVPENLDADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
3PROSPECT23gtzA0.9211.0002.796threading_3LSIVRIDAEDRWSDVVIYNNTLWYTGVPENLDADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
4PPA-I3gtzA0.9211.0005.860threading_4LSIVRIDAEDRWSDVVIYNNTLWYTGVPENLDADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
5HHPRED-l3k12_A0.3550.9652.929threading_5-HIERFEVVKRRAE-ALHGNTVYIGGQVADDSGDIQDQTRQILENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQWFPEGRAPTRACSLAELIDPRWRVE-IVVAA-
6HHPRED-g2cvl_A0.2820.9652.430threading_6-EAVKTDAIGPYAQAVKAGGFVFVSGQIPLVEGDIRVQTERV-ENLKAVLEAAGSGLSRVVQTTCFLAD-EDFPGFNEVYARYFTP-PYPARATVAVKALPRGVRVEVACVALA
7SP33gtza0.9211.0004.336threading_7LSIVRIDAEDRWSDVVIYNNTLWYTGVPENLDADAFEQTANTLAQIDAVLEKQGSSKSRILDATIFLSDKADFAAMNKAWDAWVVAGHAPVRCTVQAGLMNPKYKVEIKIVAAV
8SAM-T992dyyD0.2570.9913.428threading_8FTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFG-ESKPARVAVEVSRLPKDVLIEIEAIAYK
9MUSTER3k12D0.3390.9823.861threading_9-HIERFEVVKRRAE-ALHGNTVYIGGQADDPSGDIQDQTRQILENIDRLLQSVGSDRGQVLSVRILLAHREDYAGLNQVWDQWFPEGRAPTRACSLAELIDPRWRVEIVVAARE
10SPARKS3i7ta0.1890.9743.993threading_10-SRTMVESAVGYSRAVRIGPLVVVAGTTG-SGDDIAAQTRDALRRIEIALGQAGATLADVVRTRIYVTDISRWREVGEVHAQAF-GKIRPVTSMVEVTALAPGLLVEIEADAYV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.831 to 1jd1A
SCOP code=d.79.1.1
TM-score=0.831 to 1jd1A
SCOP code=d.79.1.1
TM-score=0.831 to 1jd1A
SCOP code=d.79.1.1
TM-score=0.831 to 1jd1A
SCOP code=d.79.1.1
TM-score=0.831 to 1jd1A
SCOP code=d.79.1.1