Template-based Modeling Results for YNFA_ECOLI

Submitted Primary Sequence

>Length 108
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT
322001110000001000000000003421111100000000000000010222110100011000000000000110221301000000000000000000001234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDGVKLTLYDWTGALIALCGMLIIVAGWGRT
1	MUSTER	2vpyC2	0.240	0.889	1.078	threading_1	LFPLTALVLALGLAALLK--SPWALFP-----LRVLAGASLLLALLYPLTLPPEARGHLLEEAGGLFLLLGLGW-----QERLAPWAGLLAAAGLRALLVLAGQWQGL
2	PPA-I	2vpyC2	0.228	0.935	1.432	threading_2	LFPLTALVLALGLAALLK--SPWALFP-----LRVLAGASLLLALLYPLTLPPEARGHLLEEAGFWYGLFLLLGLGTFWQERLAPWAGLLAAAGLRALLVLAGQWQGL
3	HHPRED-l	3b5d_A	0.224	0.907	1.217	threading_3	------YLGGAILAEVIGTTLMKFS-EGFTRLWPSVGTIICYCFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS---
4	HHPRED-g	3b5d_A	0.224	0.907	2.223	threading_4	------YLGGAILAEVIGTTLMKFS-EGFTRLWPSVGTIICYCASLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS---
5	PPA-I	2rekB	0.127	0.944	1.078	threading_5	VFQERVAQLCDEARSLAAEHPPATALTR----WLTSLAVFGAVTRGAARSLLAALDSRCEQLL--TEAGADLLARAQEDGTVRDDVTALELLSLANAVSLAAEHTPDA
6	HHPRED-l	2i68_A	0.224	0.704	1.216	threading_6	----YIYLGGAILAEVIGTTLM-------------VGTCYCASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL----
7	HHPRED-g	2i68_A	0.224	0.704	2.095	threading_7	----YIYLGGAILAEVIGTTLM-------------VGTIYCASFWLLAQTLA-----IAYAIWSGVGIVLISLLSWGFFG------AIIGMMLICAGVLIINLL----
8	PPA-I	3kavC	0.157	0.944	1.067	threading_8	AAQAPEERCRLAAQACIRACERYLALCTESSREQRQHAGDCADLCRLAALLERRSPWAPAACE--LAARYALACAERCDGDEPLERECAGACRRFVEACRPLLP----
9	PPA-I	3bniA	0.115	0.963	1.002	threading_9	VTERLTEAWRGALDTVLDEYLAMKRTAPGFSLIDFGRVAERLTELLSGYLGRRPDDDLRRVFLVAVETADTLVQLAFRVAPDGDEKIIEEARELLRAYLGRVLD----
10	MUSTER	2aawC2	0.135	0.963	0.910	threading_10	LNEFYADMIFCGVQDIHYKFNNTNLFKQNETTFLNEDLPKWSGYFEKLLKKNHTNNDKYYFVYADLAVFNLYDDIETKYPSSLKNFPLLKAHNEFISNL----NRKES

Predicted Tertiary Structure


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TM-score=0.578 to 2b0hA SCOP code=a.24.9.2	TM-score=0.620 to 2oo2A SCOP code=a.8.11.1	TM-score=0.495 to 1xeqA SCOP code=a.16.1.1	TM-score=0.513 to 1xeqA SCOP code=a.16.1.1	TM-score=0.594 to 2o7tA SCOP code=a.4.1.9