Template-based Modeling Results for YNCL_ECOLI


  Submitted Primary Sequence

>Length 31
MNVSSRTVVLINFFAAVGLFTLISMRFGWFI
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--------10--------20--------30
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNVSSRTVVLINFFAAVGLFTLISMRFGWFI
CCCCCCEEEEEEHHHHHHHHHHHHHHHEECC
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--------10--------20--------30
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNVSSRTVVLINFFAAVGLFTLISMRFGWFI
5533221000000000000000000100114
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--------10--------20--------30
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNVSSRTVVLINFFAAVGLFTLISMRFGWFI
1MUSTER2wseI0.3080.8391.335threading_1INLPSLFVPLVGLFPAVAMASLFL-----HV
2SPARKS1be3k10.2730.7101.541threading_2----RNWVPTAQLWGAVGAVGLVSAT-----
3PPA-I2rlwA0.2581.0001.293threading_3FHAYSARGVRNNYKSAVGPADWVISAVRGFI
4SP32ww9c0.3810.6771.032threading_4-RVDS-LVVL--FLSVGFIFSVIAL------
5MUSTER2rlwA0.3210.9031.305threading_5HAYSARGV---NYKSAVGPADWVISAVRGFI
6SPARKS1be3k0.2730.7101.541threading_6----RNWVPTAQLWGAVGAVGLVSAT-----
7PPA-I3la9A30.1380.9351.221threading_7YNANGTTATNTSVGAAIDNINANGIKYFH--
8MUSTER1iijA0.2670.9681.304threading_8QRASPVTFI-IATVVGVLLFLILVVVVGILI
9SPARKS2ww9c0.2860.6771.537threading_9-RVDSLVVL---FLSVGFIFSVIAL------
10PPA-I2k9yA0.2261.0001.159threading_10SPEGSGNLAVIGGVAVGVVLLLVLAGVGFFI

  Predicted Tertiary Structure

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TM-score=0.575 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.616 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.506 to 1p71A
SCOP code=a.55.1.1
TM-score=0.616 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.420 to 1jb0J
SCOP code=f.23.18.1