Template-based Modeling Results for YMIB_ECOLI


  Submitted Primary Sequence

>Length 34
MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS
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--------10--------20--------30
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS
CCEEEHHHHHHHHHHHHHHHHHHHHCCCEEECCC
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--------10--------20--------30
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS
4420112001100000000001002212112325
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--------10--------20--------30
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTYMKLTAAKRIVFFIYLFVIQFWKNASFQTKVS
1MUSTER1s5li0.2941.0001.739threading_1METLKITVYIVVTFFVLLFVFGFLSGPARNPKRK
2SPARKS3dl8c0.1761.0001.566threading_2ATISVIIFSLAIGVYLWILDLTFTKIISFILSLR
3PPA-I1s5li0.2651.0001.847threading_3METLKITVYIVVTFFVLLFVFGFLSGDPARNPKR
4SP33dl8c0.1761.0001.269threading_4ATISVIIFSLAIGVYLWILDLTFTKIISFILSLR
5MUSTER2axtm0.2351.0001.598threading_5VNQLGLIATALFVLVPSVFLIILYVQTESQQKSS
6SPARKS1jb0x0.2410.8531.427threading_6-----PTYAFRTFWAVLLLAINFLVAAYYFAAAA
7PPA-I2axtm0.2351.0001.643threading_7VNQLGLIATALFVLVPSVFLIILYVQTESQQKSS
8SP31jb0x0.2760.8531.021threading_8PTY-----AFRTFWAVLLLAINFLVAAYYFAAAA
9MUSTER2rddB0.0881.0001.386threading_9MSLILMLVVFGLIFYFMILRPQQKRTKEHKKLMD
10SPARKS1ehkc0.2260.9121.355threading_10--EEKPKGALAVILVLTLTILVFWLGAVFFARG-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.617 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.619 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.726 to 1gk7A
SCOP code=h.1.20.1
TM-score=0.619 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.726 to 1gk7A
SCOP code=h.1.20.1