Template-based Modeling Results for YMFS_ECOLI

Submitted Primary Sequence

>Length 137
MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR
CCEEECCCCCEEEECCCCCCCCCCEEECHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR
43100123220000111120132011012310211032313111022221221133223223211111221132002102300201211041211412331031021012002002201122012031122122438
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKIYCCLNTVGFFMDGCGVIPPDSKEITAEHWQSLLKSQAEGGVIDFSVFPPSIKEVIRTHDDEVADANFQKQMLISDATDFINSRQWQGKAALGRLKEDELKQYNLWLDYLEALELVDTSSAPDIEWPTPPAVQAR
1	MUSTER	2kz6A	0.133	0.715	1.106	threading_1	MLLHSVETPR-----------GEILNVSEQEARDVF-GASEQAI------------ADARKATILQTLRIERDERLRACDWTQVQ-----DVVLT------ADQKATWAKYRQALRDLETVTDLQIVWPQLPV----
2	HHPRED-l	2kz6_A	0.113	0.708	2.061	threading_2	-----------ML-LHSVETPREILNVSEQEARDVFGASE----------Q---AIADARKATILQTLRIERDERLRACDWTQVQ--D---V---VLTADQK---ATWAKYRQALRDLPETDLSQIVWPQLPV----
3	HHPRED-g	2kz6_A	0.135	0.650	1.302	threading_3	---------MLLHSVE---TPRGILNVSEQEARDV---------------------FGASEQAILQTLRIERDERLRACD-------WTQVQDV-VLTADQKA---TWAKYRQALRDLPVTDLSQIVWPQLPV----
4	SP3	2kz6a	0.124	0.708	1.070	threading_4	MLLHSVET------------PREILNVSEQEARDVF------------GASEQAI-ADARKATILQTLRIERDERLRA-----------CDWTQVQDVVLTADQKATWAKYRQALRDLETVTDLQIVWPQLPV----
5	MUSTER	3id5A1	0.149	0.883	0.696	threading_5	VKIYLIEHVIGAVA-ENGNNPRDLGKITEELLNNEKGIPFSVELLKKVNPQEVVVENEAEVPKLQALGYRVSYEPYSKVSRIFRESLPKVAIDIKFA-SNEEDYYNFLHELSLEYTRRKLRSA--------------
6	SPARKS	2kz6a	0.122	0.715	0.901	threading_6	-----------------------MLLHSVETPRGEILNVSEQEARDVFGASEQAI-ADARKATILQTLRIERDERLRA-----------CDWTQVQDVVLTADQKATWAKYRQALRDLTVTDLSQIVWPQLPV----
7	PROSPECT2	2kz6A	0.163	0.715	0.981	threading_7	MLLHSVETPRGEI-----------LNVSEQEARDVFGAS------------------------EQAIADARKATILQTLRIERDERLRACDWTQVQDVVLTADQKATWAKYRQALRDLTVTDLSQIVWPQLP----V
8	PPA-I	2kz6A	0.168	0.693	0.936	threading_8	--------------------------------------MLLHSVETPRGEILNVSEQEARDVSEQAIADARKATILQTLRIERDERLRACDWTQVQDVVLTADQKATWAKYRQALRDLTVTDLSQIVWPQLPV----
9	HHPRED-l	1x4t_A	0.177	0.577	0.563	threading_9	-----------------------------------GSSGSSGKVK--ERRPF-----LASECTELPKAEKWRRQIIGEISKKVAQIQNA---G---LGEFRIRDLGHWEVRIKELGGPDYGKVPSSG----------
10	HHPRED-g	2icg_A	0.154	0.474	0.672	threading_10	-----------------------------------------------------------------------ASSFLEEVDRLITLSGITFHAS-GTGTPELIKIYQDALTYKLFLEKYGTLTFNGVSFYGISKRGLS

Predicted Tertiary Structure


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TM-score=0.477 to 2pmsC SCOP code=h.4.19.1	TM-score=0.502 to 1rq0A SCOP code=e.38.1.1	TM-score=0.438 to 1p49A SCOP code=c.76.1.2	TM-score=0.501 to 1rq0A SCOP code=e.38.1.1	TM-score=0.491 to 1nt2B SCOP code=a.183.1.1