Template-based Modeling Results for YLBG_ECOLI

Submitted Primary Sequence

>Length 123
MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLKRRY
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLKRRY
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLKRRY
554322321211010020023123012004201012300120120022212300222233232132202320120002001112321222002112322020021001000222213313444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MLHTANPVIKHKAGLLNLAEELSNVSKACKIMGVSRDTFYRYRELVAEGGVDAQINRSRRAPNLKNRTDEATEQAVVDYAVAFPTHGQHRASNELRKQGVFISDSGVRSVWLLHNLENLKRRY
1	MUSTER	1hlvA	0.096	0.935	1.127	threading_1	MGPKRRQLFREKSRIIQEVEENPRKGEIARRFNIPPSTLSTILKNKRAILASERKYGVASTCRKTNKLSDKLEGLLIAWFQQIRAAGKEKALRIAEELGMTASNGWLDRFRRRRS--------
2	SPARKS	1k78a	0.126	0.902	1.450	threading_2	FVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS---IKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVVPSVSSINRIIRTK---------
3	PROSPECT2	1k78a	0.126	0.902	1.106	threading_3	GVNQLGGVDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSI---KPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVVPSVSSINRIIRTK---------
4	PPA-I	1mdmA	0.126	0.902	1.369	threading_4	FVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS---IKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVVPSVSSINRIIRTK---------
5	HHPRED-l	3hot_A	0.103	0.870	2.090	threading_5	----VPNKEQTRTVLIFCFHLKKTAAESHRMLVPTVKTCERWFQRFKS-GDFDVDDKEH--GKPPKRYEDAE---LQALLDEDDAQTQKQLAEQLE-----VSQQAVSNRLREMGKIQKVGR-
6	HHPRED-g	3hot_A	0.102	0.878	2.170	threading_6	----VPNKEQTRTVLIFCFHLKKTAAESHRMLVPTVKTCERWFQRFKS-GDFDVDDKEH-GKPPKRYEDAE----LQALLDEDDAQTQKQLAEQLE-----VSQQAVSNRLREMGKIQKVGRW
7	SP3	1k78a	0.131	0.870	1.336	threading_7	FVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETG-------SIKPGVIPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVVPSVSSINRIIRTK---------
8	SAM-T99	1pdnC	0.143	0.740	1.167	threading_8	----------IRLKIVEMAADGIRPCVISRQLRVSHGCVSKILNRYQETGS---------GGSKPRIATPEIENRIEEYKRSSPGMFSWEIREKLIREGVCPSVSAISRL-------------
9	MUSTER	1mdmA	0.135	0.902	1.095	threading_9	VFVNGRPLDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGS---IKPGVIGGSKPKVATPKVVEKIAEYKRQNPTMFAWEIRDRLLAERVTVSVSSINRIIRTK---------
10	SPARKS	1hlva	0.118	0.894	1.054	threading_10	QLT-----FREKSRIIQEVEENPDKGEIARRFNIPPSTLSTILKNKRAASERKYGVASTCRKTNKLSPYDKLEGLLIAWFQQIRAAGALRIAEELGMDDFTASNGWLDRFRRRRS--------

Predicted Tertiary Structure


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TM-score=0.799 to 1hlvA SCOP code=a.4.1.7	TM-score=0.578 to 1u78A SCOP code=a.4.1.2	TM-score=0.630 to 1mdmA SCOP code=a.4.1.5	TM-score=0.663 to 1mdmA SCOP code=a.4.1.5	TM-score=0.630 to 1mdmA SCOP code=a.4.1.5