Template-based Modeling Results for YKFJ_ECOLI

Submitted Primary Sequence

>Length 88
MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL
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--------10--------20--------30--------40--------50--------60--------70--------80

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL
CCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL
4211113322211110000003322112200200120140210010000110110310000000002110000122011111220324
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--------10--------20--------30--------40--------50--------60--------70--------80

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MEWYMGKYIRPLSDAVFTIASDDLWIESLAIQQLHTTANLPNMQRVVGMPDLHPGRGYPIGAAFFSVGRFYPARRRGNGAGNRNGPLL
1	MUSTER	1uc2A	0.250	1.000	2.120	threading_1	IRWEIPKFDKRMRVPGRVYADEVLMKNDRTLEQATNVAMLPGIYYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDNCGVRLIRTL
2	SPARKS	1uc2a	0.239	1.000	3.010	threading_2	IRWEIPKFDKRMRVPGRVYADEVLMKNDRTLEQATNVAMLPGIYYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDNCGVRLIRTN
3	PROSPECT2	2jz7A	0.122	0.841	0.529	threading_3	MIFTTADEIPGLQLYSLGIASTISDNVDEIVENLRKQVKAKGGMGLIAFRITCAGKFLGYGTIVKADE--------------AQFTMA
4	PPA-I	2epgB	0.244	0.977	1.069	threading_4	YTYRIPR--QGKRVDAVFFASKELEAENYASLQQLNVATLPGIVEPALAPDIHWGYGFPIGGVAAFDGVVSPGGVGFDNCGVRLLASH
5	HHPRED-l	1uc2_A	0.241	0.989	5.991	threading_5	IRWEIPKFDKRMRVPGRVYADEVLMKNDRTLEQATNVAMLPGIYYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDNCGVRLIRT-
6	HHPRED-g	1uc2_A	0.239	1.000	6.574	threading_6	IRWEIPKFDKRMRVPGRVYADEVLLKNDRTLEQATNVAMLPGIYYSIVMPDGHQGYGFPIGGVAAFDGVISPGGIGYDNCGVRLIRTN
7	SP3	1uc2a	0.250	1.000	1.542	threading_7	IRWEIPKFDKRMRVPGRVYADEVLMKNDRTLEQATNVAMLPGIYYSIVMPDGHQGYGFPIGGVAAFEGVISPGGIGYDNCGVRLIRTL
8	SAM-T99	1uc2A	0.198	0.977	5.270	threading_8	--RWEIPKFDKRMRVPGRVYADEVLLEKMTLEQATNVAMLPGIYKYSVMPDGHQGYGFPIGGVAAFDGVISPGGIGYDINCGVRLIRT
9	MUSTER	2epgB	0.256	0.977	1.993	threading_9	YTYRIPR--QGKRVDAVFFASKDLEAENYASLQQLNVATLPGIVEPALAPDIHWGYGFPIGGVAAFGGVVSPGGVGFDNCGVRLLASH
10	SPARKS	2ropa	0.111	0.920	0.639	threading_10	EALPPGNFKVSLTCSTTLIAIAGMTCASCVHSIEGMISQLEGVQQISVSLAEG------TATVLYNPAVISPEELAIEDMGFEASVV-

Predicted Tertiary Structure


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TM-score=0.545 to 1uc2A SCOP code=d.261.1.1	TM-score=0.495 to 1uc2A SCOP code=d.261.1.1	TM-score=0.550 to 1uc2A SCOP code=d.261.1.1	TM-score=0.536 to 2nocA SCOP code=d.230.6.1	TM-score=0.496 to 1uc2A SCOP code=d.261.1.1