Template-based Modeling Results for YKFF_ECOLI

Submitted Primary Sequence

>Length 79
MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR
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--------10--------20--------30--------40--------50--------60--------70

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR
5542221231211230020001111102032131000000011231200000002222002001100221223233234
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--------10--------20--------30--------40--------50--------60--------70

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTQSVLLPPGPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTDTATR
1	MUSTER	2hjjA	1.000	0.835	3.903	threading_1	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
2	SPARKS	2hjja	1.000	0.835	3.591	threading_2	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
3	PROSPECT2	2hjjA	1.000	0.835	1.367	threading_3	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
4	PPA-I	2hjjA	1.000	0.835	5.786	threading_4	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
5	HHPRED-l	2hjj_A	1.000	0.835	10.105	threading_5	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
6	HHPRED-g	2hjj_A	1.000	0.835	7.883	threading_6	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
7	SP3	2hjja	1.000	0.835	3.713	threading_7	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
8	SAM-T99	2hjjA	1.000	0.835	6.063	threading_8	---------GPFTRRQAQAVTTTYSNITLEDDQGSHFRLVVRDTEGRMVWRAWNFEPDAGEGLNRYIRTSGIRTD----
9	MUSTER	1whzA	0.154	0.823	0.731	threading_9	---------WPPRPEEVARKLRRLG--FVERAKGGHRLYT---PDGRIVVVPFHSGELPKGTFKRILRDAGLTEEEFHN
10	SPARKS	2l57a	0.104	0.975	0.768	threading_10	VENLEEAKEGIFKQKELSYVSKEREGYYARLEEEKKYTTVFLDKEGNKFYVHQGLMR--KNNIETILNSLGVKEGHHHH

Predicted Tertiary Structure


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TM-score=0.914 to 2hjjA SCOP code=d.50.3.3	TM-score=0.416 to 1xl7B SCOP code=c.43.1.3	TM-score=0.910 to 2hjjA SCOP code=d.50.3.3	TM-score=0.914 to 2hjjA SCOP code=d.50.3.3	TM-score=0.914 to 2hjjA SCOP code=d.50.3.3