Template-based Modeling Results for YJGH_ECOLI


  Submitted Primary Sequence

>Length 131
MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
CCCCEEECCCCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
55422001121330122313101001001000000201133322133203200210030022002203020300010000000021002100200120022312000000002201302010100021356
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
1MUSTER1pf5A1.0000.9924.737threading_1-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
2SPARKS3lmea0.2680.9694.682threading_2-SLKIIA--PTDKTITPSGTWSIGARAGDFVFIGGMHGTDRTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDGDIAEIDGTFYAPA-
3PROSPECT21pf5A0.9920.9923.184threading_3V-ERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
4PPA-I1pf5A1.0000.9925.497threading_4-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ
5HHPRED-l1pf5_A1.0000.9853.487threading_5-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPE-
6HHPRED-g1xrg_A0.2810.9242.544threading_6--YIEVV--KTNKAPEAIGPYSQAIVTGSFVYTSGQIPINPQTVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKD--DSFAKVNEVYAKYFS-EPYPARSCVEVSKLPGVLIEIEAVAIK---
7SP33lmea0.2620.9624.627threading_7L--KIIAP--TDKTITPSGTWSIGARAGDFVFIGGMHGTDRVTKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDGDIAEIDGTFYAPA-
8SAM-T992dyyD0.2950.9313.420threading_8----MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPTGEVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDF-AKMNEVYAEYF-GESKPARVAVEVSRLPDVLIEIEAIAYK---
9MUSTER3lmeA0.2700.9624.087threading_9L--KIIA--PTDKTITPSGTWSIGARAGDFVFIGGMHGTDRVGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKYRPVVNKVQKDIWGDGPYPPRTVLQVPALDGDIAEIDGTFYAPA-
10SPARKS1pf5a1.0000.9924.582threading_10-VERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGTPEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTWLAGFDFEIKVIARIPEQ

  Predicted Tertiary Structure

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TM-score=0.993 to 1pf5A
TM-score=0.997 to native
SCOP code=d.79.1.1
TM-score=0.993 to 1pf5A
TM-score=0.997 to native
SCOP code=d.79.1.1
TM-score=0.891 to 1qd9A
TM-score=0.884 to native
SCOP code=d.79.1.1
TM-score=0.990 to 1pf5A
TM-score=0.994 to native
SCOP code=d.79.1.1
TM-score=0.993 to 1pf5A
TM-score=0.997 to native
SCOP code=d.79.1.1

  Experimental Structure

Download 1pf5A
SCOP code=d.79.1.1