Template-based Modeling Results for YJGF_ECOLI

Submitted Primary Sequence

>Length 128
MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
CCCEECCCCCCCCCCCCCCEEEECCEEEEECCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCHHHEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
53221113401201011020010110000001011124212023212110220030022002203030200010000011020012002003100233322100000010140244020101000135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSCVEVARLPKDVKIEIEAIAVRR
1	MUSTER	1qu9A	1.000	0.984	4.420	threading_1	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVRR
2	SPARKS	3lmea	0.246	0.984	4.915	threading_2	LKIIAPTDKTITPSGTWSIGARAGDFVFIGGMHGTDRVTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKRPVVNKVQKDIWGDG--PYPPRTVLQVPALDQGDIAEIDGTFYAP
3	PROSPECT2	3r0pA	0.403	0.969	3.251	threading_3	NKAIIHSDNAPAAIGTYSQAVKVNNTVYLSGQIPLDPVTMQLEGDFAVQAHQVFKNLRAVCEAAGGGLRDIVKLNVYLTDLANFPIVNEVMGQYFQA---PYPARAAIGINQLPRASLIEADGIMV-I
4	PPA-I	1qd9A	0.492	0.969	4.864	threading_4	-TKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDT---HKPARSCVEVARLPKDALVEIEVIALVK
5	HHPRED-l	1qu9_A	1.000	0.977	3.263	threading_5	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVR-
6	HHPRED-g	1qu9_A	1.000	0.984	2.697	threading_6	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARS-VEVARLPKDVKIEIEAIAVRR
7	SP3	3lmea	0.246	0.984	4.720	threading_7	LKIIAPTDKTITPSGTWSIGARAGDFVFIGGMHGTDRVTGKMVDGDEARIRRMFDNMLAAAEAAGATKADAVRLTVFVTDVAKRPVVNKVQKDIWGDG--PYPPRTVLQVPALDQGDIAEIDGTFYAP
8	SAM-T99	2dyyD	0.560	0.977	3.902	threading_8	MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGE---SKPARVAVEVSRLPKDVLIEIEAIAYKE
9	MUSTER	2dyyD	0.560	0.977	4.328	threading_9	MKEVIFTENAPKPIGPYSQAIKAGNFLFIAGQIPIDPKTGEVKGDIKDQTRQVLENIKAILEAAGYSLNDVIKVTVYLKDMNDFAKMNEVYAEYFGE---SKPARVAVEVSRLPKDVLIEIEAIAYKE
10	SPARKS	1qu9a	0.984	0.984	4.646	threading_10	-SKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPADVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATFPARSVE-VARLPKDVKIEIEAIAVRR

Predicted Tertiary Structure


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TM-score=0.991 to 1qu9A TM-score=0.999 to native SCOP code=d.79.1.1	TM-score=0.991 to 1qu9A TM-score=0.999 to native SCOP code=d.79.1.1	TM-score=0.907 to 1qd9A TM-score=0.911 to native SCOP code=d.79.1.1	TM-score=0.940 to 1x25B TM-score=0.917 to native SCOP code=d.79.1.1	TM-score=0.982 to 1qd9A TM-score=0.920 to native SCOP code=d.79.1.1

Experimental Structure

Download 1qu9A

SCOP code=d.79.1.1