Template-based Modeling Results for YJFN_ECOLI

Submitted Primary Sequence

>Length 91
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA
4321100001000000000002003202231133122001000121211131014100210443302000000012333231020101014
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--------10--------20--------30--------40--------50--------60--------70--------80--------90

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVSNISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA
1	MUSTER	2jnaA	0.276	0.956	2.392	threading_1	MKKRIIAAAL--LATVASFSTLAAEQVSKQEISHFKKVGTINVSGQISSPSDLREKLSELADAKGGKYYHIIAAREHG--PNFEAVAEVYN
2	SPARKS	2jnaa	0.287	0.956	2.571	threading_2	MKKRIIAAA--LLATVASFSTLAAEQVSKQEISKLVKVGTINVSGQISSPSDLREKLSELADAKGGKYYHIIAAREHG--PNFEAVAEVYN
3	PROSPECT2	2jnaA	0.276	0.956	1.188	threading_3	MKKRIIAAA--LLATVASFSTLAAEQVSKQEISKLVKVGTINVGGQISSPSDLREKLSELADAKGGKYYHIIAAREH--GPNFEAVAEVYH
4	PPA-I	2jnaA	0.276	0.956	2.790	threading_4	MKKRIIAAAL--LATVASFSTLAAEQVSKQEISHFKKVGTINVSGQISSPSDLREKLSELADAKGGKYYHIIAARE--HGPNFEAVAEVYN
5	HHPRED-l	2jna_A	0.291	0.945	6.015	threading_5	MKKRIIAAALLA--TVASFSTLAAEQVSKQEISKLVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREH--GPNFEAVAEVY-
6	HHPRED-g	2jna_A	0.299	0.956	5.019	threading_6	MKKRIIAAA-LLAT-VASFSTLAAEQVSKQEISHLVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREHG--PNFEAVAEVYN
7	SP3	2jnaa	0.287	0.956	2.494	threading_7	MKK--RIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSGQISSPSDLREKLSELADAKGGKYYHIIAAREHG--PNFEAVAEVYN
8	SAM-T99	2jnaA	0.267	0.945	2.750	threading_8	--MKKRIIAAALLATVASFSTLAAEQVSKQEIFKLVKVGTINVSQSGGSPSDLREKLSELADAKGGKYYHII--AAREHGPNFEAVAEVY-
9	MUSTER	2nocA	0.230	0.956	2.337	threading_9	MKTGYKLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLT---SGQTENKIHGTADIYK
10	SPARKS	2noca	0.207	0.956	2.095	threading_10	TGYKVMLGALAFVVTNVYAAEIMKKTDFDKVASEYTKIGTISTTG-EMSPLDAREDLIKKADEKGADVVVLT---SGQTENKIHGTADIYK

Predicted Tertiary Structure


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TM-score=0.657 to 2jnaA SCOP code=d.230.6.1	TM-score=0.745 to 2nocA SCOP code=d.230.6.1	TM-score=0.655 to 2jnaA SCOP code=d.230.6.1	TM-score=0.679 to 2jnaA SCOP code=d.230.6.1	TM-score=0.666 to 2jnaA SCOP code=d.230.6.1