Template-based Modeling Results for YJFI_ECOLI

Submitted Primary Sequence

>Length 133
MTWNPLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTWNPLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH
CCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEEEEECHHHCCCHHHHHHHHHHCCCCCCCHHHCEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTWNPLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH
4511021002003313332020223220000202323302000000231000100002122122032012100312320100200011034210000000003312132001101100200120022023225
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTWNPLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINILFTSRQMIIETFICPVSSISNPDEFNTFLLRNQKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEITSLVDNALDLAEITEEYSH
1	MUSTER	1jyoA	0.136	0.940	1.086	threading_1	LQ-AHQDIIANIGEKLGLPLTFDDNNQCLLLL----SDIFTSIEAKDDIWLLNGMIIPLSPVCG-DSIWRQIMVINGE--LAANNLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAK
2	SPARKS	1jyoa	0.156	0.962	1.003	threading_2	----LQAHQDIIANIGELGLPLTFDDNNQCLLLLD-SDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAK
3	PROSPECT2	1jyoa	0.132	0.970	1.019	threading_3	LQAHQDIIANIGEKLG-LPLTFDDNNQCLLLL---DSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAK
4	PPA-I	1jyoA	0.156	0.962	1.433	threading_4	----LQAHQDIIANIGELGLPLTFDDNNQCLLLLD-SDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAK
5	HHPRED-l	2plg_A	0.139	0.917	0.887	threading_5	LENAVEIIETVISSLHQGAPLVGQTDSG-KIW-FRYGSAEVFVQLSGDFLTIWSPVLPLP-VADELALYRKLLTLNWLTTFAHFAIA---EEQVQVVASRTLGGIT----AGEISRLITIVATLADDYDDAL-
6	HHPRED-g	2plg_A	0.146	0.925	0.901	threading_6	PLEAVEIIETVISSLHQGAPLVGQTDSG-KIW-FRYGSAEVFVQLSGDFLTIWSPVLPLP-VADELALYRKLLTLNWLTTFAHFAIA---EEQVQVVASR-TLGG-IT--AGEISRLITIVATLADDYDDALR
7	SP3	1jyoa	0.156	0.962	0.756	threading_7	----LQAHQDIIANIGEKGLPLTFDDNNQCLLLLD-SDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAK
8	SAM-T99	3e1tA2	0.163	0.647	0.557	threading_8	-------------PEVFDLIVIGGGPGGSTLAS--------FVAMRGHRLLLEREAFPRHQIGERARFDDMLLRNSE---------KGVDVRERHEV----------------IDVLFEGERAVGVRYRNTE-
9	MUSTER	1ry9A	0.164	0.917	0.997	threading_9	MS--VQLVRDSLFTIGCPPSIITDSHSAITISLDSMPA--INIALVNEQVMLWANFDAPSDVKSAYNILNLMLMNFSINEL----VELHRSDEYLQLRVVIKDDY-VHD-GIVFAEILHEFYQRMEILNGVL-
10	SPARKS	1ttwa	0.171	0.880	0.796	threading_10	---TYSSLLEEFATELGLEEIETNELGHGAVTIDKI--WVVHLAPINEKELVAFMRAG---ILTGQSQLYDILRKNLFSPLSGVIRCALDKDDHWLLWSQLNINTSGTQLASVLTSLVDKAVTLS--------

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.901 to 1jyoA SCOP code=d.198.1.1	TM-score=0.958 to 1jyoA SCOP code=d.198.1.1	TM-score=0.954 to 1jyoA SCOP code=d.198.1.1	TM-score=0.967 to 1jyoA SCOP code=d.198.1.1	TM-score=0.954 to 1jyoA SCOP code=d.198.1.1