Template-based Modeling Results for YJBQ_ECOLI

Submitted Primary Sequence

>Length 138
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
CCEEEEEEEECCCCEEEECCHHHHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCEECCCCCCEEEEEECCCCCCCEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
432112021204231001003200220131151320000000110000000022122202200220033001330313111302210100010000101000001202011010100000103242121201010215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQHTSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMLGTSLVLPVHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE
1	MUSTER	2p6cA	0.259	0.978	4.129	threading_1	MAYTKYLTFNTKKRELIRITDEVKKAVEES-EVKEGLCLVSSMHLTSSVIIQDD-EEGLHEDIWEWLEKLAPYRPDYKHHRTGEDNGDAHLKNLLTHLQVVLPITNGKLDLGPWQEIFYAEFDG-QRPKRVVIKIIGE
2	SPARKS	1vmja	0.250	0.986	5.145	threading_2	MSYRKELWFHTKRRREFINITPLLEECVRESGIKEGLLLCNAMHITASVFINDD-EPGLHHDFEVWLEKLAPEKPQYKHNDTGEDNADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFDG-MRPKRVLVKIIGE
3	PROSPECT2	1vmfA	0.265	0.986	2.903	threading_3	HHHMKTFHLTTQSRDEMVDITSQIETWIRETGVTNGVAIVSSLHTTAGITVNENADPDVKRDMIMRLDEVYPWHHE--NDRHMEGNTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLLTD
4	PPA-I	1vmfA	0.257	0.986	5.266	threading_4	HHHMKTFHLTTQSRDEMVDITSQIETWIRETGVTNGVAIVSSLHTTAGITVNENADPDVKRDMIMRLDEVYPWHHENDR--HMEGNTAAHLKTSTVGHAQTLIISEGRLVLGTWQGVYFCEFDGPRTNRKFVVKLLTD
5	HHPRED-l	1vmj_A	0.254	0.971	5.132	threading_5	KSYRKELWFHTKRRRFINITPL-LEECVRESGIKEGLLLCNAMHITASVFINDD-EPGLHHDFEVWLEKLAPEKSQYKHNDTGEDNADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFDG-MRPKRVLVKIIG-
6	HHPRED-g	2p6c_A	0.252	0.978	4.198	threading_6	KAYTKYLTFNTKKRELIRITDEVKKAVEE-SEVKEGLCLVSSMHLTSSVIIQDDEE-GLHEDIWEWLEKLAPYRPDYKHHRTGEDNGDAHLKNLLTHLQVVLPITNGKLDLGPWQEIFYAEFDG-QRPKRVVIKIIGE
7	SP3	1vmja	0.250	0.986	5.171	threading_7	MSYRKELWFHTKRRREFINITPLLEECVRESGIKEGLLLCNAMHITASVFINDD-EPGLHHDFEVWLEKLAPEKPQYKHNDTGEDNADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFDG-MRPKRVLVKIIGE
8	SAM-T99	1xbfA	0.264	0.906	4.294	threading_8	----EYSLKTSNDDQFIDITNLVKKAVDE-SGVSDGAV-VFCPHTTAGITINENADPDVTRDILVNLDKVFPKVGDYKHV---EGNSHAHIKASL-GSSQQIIIENGKLKLGTWQGIYFTEFDGPRDRKVFVKII---
9	MUSTER	1vmjA	0.259	0.978	4.032	threading_9	MSYRKELWFHTKRREFINITPLLEECVRES-GIKEGLLLCNAMHITASVFINDD-EPGLHHDFEVWLEKLAPEKPQYKHNDTGEDNADAHLKRTIMGREVVIAITDRKMDLGPWEQVFYGEFDG-MRPKRVLVKIIGE
10	SPARKS	1vpha	0.230	0.978	4.999	threading_10	MVYFDDIYVSTARQELVDITDQVEQIVEKS-GIKNGICLIFVAHSTAAIVANEH-ERGLMEDILTKIKEFTEPSRSWKHNLI-DDNAHAHLGATFLGAERVFPVREGKLVRGTWQNIFLVELDGPRSERHITVEILGE

Predicted Tertiary Structure


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TM-score=0.944 to 1vmjA SCOP code=d.273.1.1	TM-score=0.952 to 1vmjA SCOP code=d.273.1.1	TM-score=0.968 to 1vmjA SCOP code=d.273.1.1	TM-score=0.985 to 1vmfA SCOP code=d.273.1.1	TM-score=0.984 to 1vmfA SCOP code=d.273.1.1