Template-based Modeling Results for YJAA_ECOLI

Submitted Primary Sequence

>Length 127
MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQK
CCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQK
4440001013210102104243201020212131000000100120022001211432113111214211000001222432112111200120012022220100000013120112201211344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSVLYIQIRRNQITVRDLESKREVSGDAAFSNQRLLIANFFVAEKVLQDLVLQLHPRSTWHSFLPAKRMDIVVSALEMNEGGLSQVEERILHEVVAGATLMKYRQFHIHAQSAVLSDSAVMAMLKQK
1	MUSTER	1jcfA2	0.204	0.890	1.661	threading_1	PSVIAIDSTTGEILKV-GKTPATIKAIRPMRDG--VIADYTVALVMLRYFINKAKGGMNL----FKPRVVIGVP------IGITDVERRAILDAGLEAGASKVFLIEAAAIGSNLTAVAKGAGM-DK
2	SPARKS	1jcfa1	0.196	0.803	2.732	threading_2	PSVIAIDSTTGEILKMIGKTPATIKAIRPMRDG--VIADYTVALVMLRYFINKAKGGMN----LFKPRVVIGVP------IGITDVERRAILDAGLEAGASKVFLIMAAAIGSN-------------
3	PROSPECT2	1jcfa1	0.162	0.827	0.808	threading_3	MANTLVFLRGKGIVVNEGKTPATIKAIRPMRDG--VIADYTVALVMLRYFINKAKGGM------NLFKPRVVIGV----PIGITDVERRAILDAGLEAGASKVFLIE----------EPMAAAIGSN
4	PPA-I	1jcfA2	0.200	0.906	2.185	threading_4	PSVIAIDSTTGEILKVGGKTPATIKAIRPMRDG--VIADYTVALVMLRYFINKAKGGM----NLFKPRVVIGVP------IGITDVERRAILDAGLEAGASKVFLIEAAAIGSNLTAVAKGAGMVLD
5	HHPRED-l	1jce_A	0.174	0.858	1.440	threading_5	PSVIAIDSTTGEILVGNGKTPATIKAIRP-RDG--VIADYTVALV-LRYFINKAKGG-N------LFKPRVVI----GVPIGITDVERRAILDAGLEAGASKVFLI-AAAIGSNLNVEEPSGN-DE-
6	HHPRED-g	1jce_A	0.183	0.858	3.004	threading_6	PSVIAIDKVGLEAKN-IGKTPATIKAIRP-RDG--VIADYTVALV-LRYFINKAKGG-N----LFKPRVVIGVPI------GITDVERRAILDAGLEAGASKVFLI-AAAIGSNLNVEEPSGN-VVD
7	SP3	1jcfa1	0.196	0.803	2.488	threading_7	PSVIAIDSTTGEILKMIGKTPATIKAIRPMRDG--VIADYTVALVMLRYFINKAKGGM----NLFKPRVVIGVP------IGITDVERRAILDAGLEAGASKVFLIMAAAIGSN-------------
8	SAM-T99	1jcfA2	0.140	0.843	3.157	threading_8	--------VGLEAKNMIGKTPATIKAIRPM--RDGVIADYTVALVMLRYFINKAKGGMN------LFKPRVVIGVPI----GITDVERRAILDAGLEAGASKVFLIEEPMAGMVLDKVNILKKLQGA
9	MUSTER	2wctA1	0.164	0.866	0.789	threading_9	-----------KIKACIDEVTTTLEETKFLTNKLLLFADYHDSQNMLRSFLEKDAPYMVGDVITSGDITCVVIP--SKKAGGTTEMLSRALKK----VPVDEYITTYPGQGCAGYTLEEAKTALKKK
10	SPARKS	1jcfa	0.188	0.882	2.547	threading_10	PSVIAIDSTTGEILKMIGKTPATIKAIRPMRDGV--IADYTVALVMLRYFINKAKGGMN----LFKPRVVIGVP------IGITDVERRAILDAGLEAGASKVFLIMAAAIGSNLNVEEPSGNM---

Predicted Tertiary Structure


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TM-score=0.734 to 1jcfA SCOP code=c.55.1.1	TM-score=0.728 to 1jcfA SCOP code=c.55.1.1	TM-score=0.631 to 1jcfA SCOP code=c.55.1.1	TM-score=0.654 to 1jcfA SCOP code=c.55.1.1	TM-score=0.759 to 1jcfA SCOP code=c.55.1.1